| MirGeneDB ID | Spt-Mir-205-P4 |
|---|---|
| Family name | MIR-205 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-205-P2 |
| Orthologues | Aca-Mir-205-P4 Ami-Mir-205-P4 Bta-Mir-205-P4 Cfa-Mir-205-P4 Cja-Mir-205-P4 Cli-Mir-205-P4 Cmi-Mir-205-P4 Cpi-Mir-205-P4 Cpo-Mir-205-P4 Dno-Mir-205-P4 Dre-Mir-205-P4a Eca-Mir-205-P4 Ete-Mir-205-P4 Gga-Mir-205-P4 Gja-Mir-205-P4 Gmo-Mir-205-P4a Gmo-Mir-205-P4b Hsa-Mir-205-P4 Laf-Mir-205-P4 Lch-Mir-205-P4 Loc-Mir-205-P4 Loc-Mir-205-P4-as Mal-Mir-205-P4a Mal-Mir-205-P4b Mdo-Mir-205-P4 Mml-Mir-205-P4 Mmr-Mir-205-P4 Mmu-Mir-205-P4 Mun-Mir-205-P4 Neu-Mir-205-P4 Oan-Mir-205-P4 Ocu-Mir-205-P4 Pab-Mir-205-P4 Pbv-Mir-205-P4 Rno-Mir-205-P4 Sha-Mir-205-P4 Sto-Mir-205-P4 Tgu-Mir-205-P4 Tni-Mir-205-P4a Xla-Mir-205-P4c Xla-Mir-205-P4d Xtr-Mir-205-P4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01002275.1: 437140-437198 [+] UCSC Ensembl |
| Seed | CCUUCAU |
| Precursor (pre-Mir +30nt flank) |
CAAGUUAAGAAUGAUCCAUGGGUUCUGUUGUCCUUCAUUCCACCGGAGUCUGUCUCAUACCUAAUCAGAUUUCAGUGGAGUGAAGCACAAGAGACAUGGAGUAGAAUCAACAAGAAGAGGet precursor sequence |
| Structure | 10 20 30 40 50 CAAGUUAAGAAUGAUCCAUGGGU--| G C C UCUCAU UCU UUGU CUUCAUUCCAC GGAGUCUG \ AGA AACA GAAGUGAGGUG CUUUAGAC A GAGAAGAACAACUAAGAUGAGGUAC^ G C A UAAUCC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Spt-Mir-205-P4_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCCUUCAUUCCACCGGAGUCUG -22
Get sequence
|
| Star sequence | Spt-Mir-205-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- GAUUUCAGUGGAGUGAAGCACA -59
Get sequence
|
