| MirGeneDB ID | Spt-Mir-205-P2 |
|---|---|
| Family name | MIR-205 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-205-P4 |
| Orthologues | Aca-Mir-205-P2 Ami-Mir-205-P2 Cli-Mir-205-P2 Cmi-Mir-205-P2 Cpi-Mir-205-P2 Gga-Mir-205-P2 Gja-Mir-205-P2 Pbv-Mir-205-P2 Pma-Mir-205-o2 Sto-Mir-205-P2 Tgu-Mir-205-P2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01000343.1: 3045689-3045747 [-] UCSC Ensembl |
| Seed | CCUUCAU |
| Precursor (pre-Mir +30nt flank) |
AAGGGGACCCUACGAUCCAUGACUCAGGUGCCCUUCAUUCCACCGGAAUCUGUAGAGACAGAAACCAGAUUUCAGUGAGAUGAAGCGCAUUUGAGAUGGAACUCAUCGCCUCAUGUUUGGet precursor sequence |
| Structure | 10 20 30 40 50 AAGGGGACCCUACGAUCCAUGA--| C UC C UAGAGA CUCAGGUGC CUUCAU CAC GGAAUCUG \ GAGUUUACG GAAGUA GUG CUUUAGAC C GUUUGUACUCCGCUACUCAAGGUA^ C GA A CAAAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-205-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CCCUUCAUUCCACCGGAAUCUG -22
Get sequence
|
| Star sequence | Spt-Mir-205-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- GAUUUCAGUGAGAUGAAGCGCA -59
Get sequence
|
