MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-205-P2

Family name MIR-205 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-205-P1  Cmi-Mir-205-P4 
Orthologues Aca-Mir-205-P2  Ami-Mir-205-P2  Cli-Mir-205-P2  Cpi-Mir-205-P2  Gga-Mir-205-P2  Gja-Mir-205-P2  Pbv-Mir-205-P2  Pma-Mir-205-o2  Spt-Mir-205-P2  Sto-Mir-205-P2  Tgu-Mir-205-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635871.1: 1799406-1799465 [+] UCSC Ensembl
Seed CCUUCAU
Precursor
(pre-Mir +30nt flank)		 
GCACAGCCGGUAAGCCAUGAUUUUUUGAUGCCCUUCAUUCCACCGGAAUCUGUACUGGCAGAAAUCCGGAUUUCAGUGAAAUGAGGAACAUUAGAACAUGGAUCCAACGAAGGAGUGUUG
Get precursor sequence
Structure
        10        20          30        40        50         
GCACAGCCGGUAAGCCAUGAUU--|       CC       C   C        UACUGG 
                        UUUUGAUG  CUUCAUU CAC GGAAUCUG      C
                        AAGAUUAC  GGAGUAA GUG CUUUAGGC      A
GUUGUGAGGAAGCAACCUAGGUAC^       AA       A   A        CUAAAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-205-P2_5p
mirBase accessionNone
Sequence 
0- CCCUUCAUUCCACCGGAAUCUG -22
Get sequence
Star sequence

Cmi-Mir-205-P2_3p*
mirBase accessionNone
Sequence 
38- GAUUUCAGUGAAAUGAGGAACA -60
Get sequence