MirGeneDB

MirGeneDB ID

Gga-Mir-205-P2

Family name MIR-205 (all species)
Seed CCUUCAU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-205b
Paralogues Gga-Mir-205-P1 
Orthologues Aca-Mir-205-P2  Ami-Mir-205-P2  Cli-Mir-205-P2  Cpi-Mir-205-P2  Sto-Mir-205-P2  Tgu-Mir-205-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(galGal5)
1: 1273706-1273764 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAGAUACACUACUAGGGCCUUCCUGAUGCCCUUCAUUCCACCGGAAUCUGUCAGUGCAGAAACCAGAUUUCAGUGAAAUGAAGCCCAUCAGAGAGGCAGCUCAGCCUCUGGUCUCAU
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Structure
        10          20        30        40        50         
GUGAGAUACACUACUAGG--|   UC      CC       C   C        UCAGUG 
                    GCCU  CUGAUG  CUUCAUU CAC GGAAUCUG      \
                    CGGA  GACUAC  GAAGUAA GUG CUUUAGAC      C
UACUCUGGUCUCCGACUCGA^   GA      CC       A   A        CAAAGA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-205-P2_5p

MirBase accessionMIMAT0001164
Sequence
0- CCCUUCAUUCCACCGGAAUCUG -22
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Validated targets TargetScanVert: gga-miR-205b
miRDB: MIMAT0001164
Star sequence

Gga-Mir-205-P2_3p*

MirBase accessionNone
Sequence
37- GAUUUCAGUGAAAUGAAGCCCA -59
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