MirGeneDB ID | Ebu-Mir-205-P6 |
Family name |
MIR-205 (all species) |
Species |
Inshore hagfish (Eptatretus burgeri) |
MiRBase ID |
|
Paralogues |
Ebu-Mir-205-P5
|
Orthologues |
|
Node of Origin (locus) |
E. burgeri
|
Node of Origin (family) |
Vertebrata
|
Genome context (Eburgeri_3) |
FYBX02009826.1: 1134510-1134566 [+]
UCSC
Ensembl
|
Seed |
CCUUCAU |
Precursor (pre-Mir +30nt flank) |
CUGACUCUGAUUUCACCUGGCUCCUUCGGGUCCUUCAUUCCACCGGUGUCUGUUUAAUGGCUGCAGACGUCCGUGGCAUGGAGGCCUCGAGGGGGCUGCAUAGCAUGGAGGCCUUUA
Get precursor sequence
|
Structure | 10 20 30 40 50
CUGACUCUGAUUUCACCU--| U U C - GUUUAA
GGCUCCUUCGGG CCUUCAU CCAC GG UGUCU \
UCGGGGGAGCUC GGAGGUA GGUG CC GCAGA U
AUUUCCGGAGGUACGAUACG^ C C - U CGUCGG
110 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ebu-Mir-205-P6_5p |
mirBase accession | None |
Sequence |
0- UCCUUCAUUCCACCGGUGUCU -21
Get sequence
|
Star sequence |
Ebu-Mir-205-P6_3p* |
mirBase accession | None |
Sequence |
36- ACGUCCGUGGCAUGGAGGCCU -57
Get sequence
|