Let-7-P2b3

MirGeneDB ID

Loc-Let-7-P2b3

Family name

Species

MiRBase ID

Paralogues

Loc-Let-7-P1b Loc-Let-7-P1c Loc-Let-7-P1d Loc-Let-7-P2a1 Loc-Let-7-P2a2 Loc-Let-7-P2a3 Loc-Let-7-P2a4 Loc-Let-7-P2b1 Loc-Let-7-P2b2 Loc-Let-7-P2b4 Loc-Let-7-P2c1 Loc-Let-7-P2c2 Loc-Let-7-P2c3

Orthologues

Aae-Let-7 Aca-Let-7-P2b3 Aga-Let-7 Agr-Let-7 Ami-Let-7-P2b3 Bge-Let-7 Bko-Let-7 Bpl-Let-7 Bta-Let-7-P2b3 Cfa-Let-7-P2b3 Cja-Let-7-P2b3 Cpi-Let-7-P2b3 Cpo-Let-7-P2b3 Cte-Let-7 Dan-Let-7 Dlo-Let-7 Dma-Let-7 Dme-Let-7 Dmo-Let-7 Dno-Let-7-P2b3 Dpu-Let-7 Dre-Let-7-P2b3a Dsi-Let-7 Dya-Let-7 Eba-Let-7 Eca-Let-7-P2b3 Egr-Let-7 Esc-Let-7 Ete-Let-7-P2b3 Gja-Let-7-P2b3 Gmo-Let-7-P2b3a Gmo-Let-7-P2b3b Gpa-Let-7 Gsa-Let-7 Gsp-Let-7 Hme-Let-7 Hmi-Let-7 Hru-Let-7 Hsa-Let-7-P2b3 Isc-Let-7 Laf-Let-7-P2b3 Lan-Let-7 Lgi-Let-7 Lhy-Let-7 Llo-Let-7 Mal-Let-7-P2b3a Mgi-Let-7 Mml-Let-7-P2b3 Mmr-Let-7-P2b3 Mmu-Let-7-P2b3 Mom-Let-7 Mun-Let-7-P2b3 Npo-Let-7 Oan-Let-7-P2b3 Obi-Let-7 Ocu-Let-7-P2b3 Ofu-Let-7 Ovu-Let-7 Pab-Let-7-P2b3 Pau-Let-7 Pbv-Let-7-P2b3 Pca-Let-7 Pcr-Let-7 Pdu-Let-7 Pfl-Let-7 Ple-Let-7 Pmi-Let-7 Pve-Let-7 Rno-Let-7-P2b3 Rph-Let-7 Sko-Let-7 Sma-Let-7 Sne-Let-7 Snu-Let-7 Spt-Let-7-P2b3 Spu-Let-7 Sro-Let-7 Sto-Let-7-P2b3 Tca-Let-7 Tni-Let-7-P2b3a Tni-Let-7-P2b3b Tur-Let-7 War-Let-7 Xbo-Let-7 Xla-Let-7-P2b3c Xla-Let-7-P2b3d Xtr-Let-7-P2b3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(LepOcu1)

LG1: 3397489-3397568 [+] Ensembl

Clustered miRNAs
(< 50kb from Let-7-P2b3)

Let-7-P2a3 LG1: 3397087-3397157 [+] Ensembl
Let-7-P2b3 LG1: 3397489-3397568 [+] Ensembl

Seed

GAGGUAG

Precursor
(pre-Mir +30nt flank)

CUUGAGAGGAGGACCAGGGCUCUGCUGGGGUGAGGUAGUAAGUUGUGUUGUUGUUGGGGUUUGGGAUGCGUGCCCCCUUGCGGAGAUAACUAUACAACUUACUGCCUUCCCCAGUGGAGCAGCUCCACACAUCCCCCCCA

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Structure

        10          20        30        40        50        60          
CUUGAGAGGAGGACCAGG--|   UG      U                 U   GUUGGGGUUUGGGAUGC 
                    GCUC  CUGGGG GAGGUAGUAAGUUGUGU GUU                 \
                    CGAG  GACCCC UUCCGUCAUUCAACAUA CAA                 G
ACCCCCCCUACACACCUCGA^   GU      -                 U   UAGAGGCGUUCCCCCGU 
.       130       120       110        100        90        80

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

Tissue expression

Br	Br	He	He	He	He	Ov	Ov	Ov	Ov	Te	Te	Te	Te	To

Mature sequence

Loc-Let-7-P2b3_5p

mirBase accession

None

Sequence

0- UGAGGUAGUAAGUUGUGUUGUU -22

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Star sequence

Loc-Let-7-P2b3_3p*

mirBase accession

None

Sequence

59- CUAUACAACUUACUGCCUUCC -80

Get sequence