MirGeneDB 2.1

MirGeneDB ID

Mun-Let-7-P2b3

Family name LET-7 (all species)
Seed GAGGUAG
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Let-7-P1b  Mun-Let-7-P1c  Mun-Let-7-P1d  Mun-Let-7-P2a1  Mun-Let-7-P2a2  Mun-Let-7-P2a3  Mun-Let-7-P2a4  Mun-Let-7-P2b1  Mun-Let-7-P2b2  Mun-Let-7-P2b4  Mun-Let-7-P2c1  Mun-Let-7-P2c2  Mun-Let-7-P2c3  Mun-Let-7-P2c4 
Orthologues Aae-Let-7  Aca-Let-7-P2b3  Ami-Let-7-P2b3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b3  Cfa-Let-7-P2b3  Cgi-Let-7  Cpi-Let-7-P2b3  Cpo-Let-7-P2b3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b3  Dpu-Let-7  Dre-Let-7-P2b3a  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b3  Gja-Let-7-P2b3  Gmo-Let-7-P2b3a  Gmo-Let-7-P2b3b  Hme-Let-7  Hsa-Let-7-P2b3  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Loc-Let-7-P2b3  Mal-Let-7-P2b3a  Mml-Let-7-P2b3  Mmu-Let-7-P2b3  Npo-Let-7  Oan-Let-7-P2b3  Obi-Let-7  Ocu-Let-7-P2b3  Ovu-Let-7  Pbv-Let-7-P2b3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b3  Sko-Let-7  Spt-Let-7-P2b3  Spu-Let-7  Sto-Let-7-P2b3  Tca-Let-7  Tni-Let-7-P2b3a  Tni-Let-7-P2b3b  Xbo-Let-7  Xla-Let-7-P2b3c  Xla-Let-7-P2b3d  Xtr-Let-7-P2b3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)
Let-7-P2b3_LR594633.1:291323761-291324040: 101-180 [+]
Precursor
(pre-Mir +30nt flank)
CAGCAUCCUUGGAAGCCGCCCUUGCUGGGGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAAUAUUUUACCCCAUUUUGGAGAUAACUAUACAACUUACUGCCUUCCUCUGCGGAUGGUAUUUGCUACUAUUAUAUC
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Structure
        10         20         30        40        50        60          
CAGCAUCCUUGGAAGCC-   C-|   U    U                 U   GUGGGGUAGGGAAUAUU 
                  GCC  UUGC GGGG GAGGUAGUAAGUUGUAU GUU                 \
                  UGG  GGCG CUCC UUCCGUCAUUCAACAUA CAA                 U
CUAUAUUAUCAUCGUUUA   UA^   U    -                 U   UAGAGGUUUUACCCCAU 
.       130       120       110        100        90        80
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
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Mature sequence

Mun-Let-7-P2b3_5p

mirBase accessionNone
Sequence
0- UGAGGUAGUAAGUUGUAUUGUU -22
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Star sequence

Mun-Let-7-P2b3_3p*

mirBase accessionNone
Sequence
59- CUAUACAACUUACUGCCUUCC -80
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