MirGeneDB 2.1
MirGeneDB ID

Xla-Let-7-P2b3c

Family name LET-7 (all species)
Seed GAGGUAG
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Let-7-P1b3  Xla-Let-7-P1b4  Xla-Let-7-P1c3  Xla-Let-7-P1c4  Xla-Let-7-P2a1c  Xla-Let-7-P2a1d  Xla-Let-7-P2a2c  Xla-Let-7-P2a2d  Xla-Let-7-P2a3d  Xla-Let-7-P2b2c  Xla-Let-7-P2b2d  Xla-Let-7-P2b3d  Xla-Let-7-P2c2  Xla-Let-7-P2c3c  Xla-Let-7-P2c3d  Xla-Let-7-P2c4 
Orthologues Aae-Let-7  Aca-Let-7-P2b3  Ami-Let-7-P2b3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b3  Cfa-Let-7-P2b3  Cgi-Let-7  Cpi-Let-7-P2b3  Cpo-Let-7-P2b3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b3  Dpu-Let-7  Dre-Let-7-P2b3a  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b3  Gja-Let-7-P2b3  Gmo-Let-7-P2b3a  Gmo-Let-7-P2b3b  Hme-Let-7  Hsa-Let-7-P2b3  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Loc-Let-7-P2b3  Mal-Let-7-P2b3a  Mml-Let-7-P2b3  Mmu-Let-7-P2b3  Mun-Let-7-P2b3  Npo-Let-7  Oan-Let-7-P2b3  Obi-Let-7  Ocu-Let-7-P2b3  Ovu-Let-7  Pbv-Let-7-P2b3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b3  Sko-Let-7  Spt-Let-7-P2b3  Spu-Let-7  Sto-Let-7-P2b3  Tca-Let-7  Tni-Let-7-P2b3a  Tni-Let-7-P2b3b  Xbo-Let-7  Xtr-Let-7-P2b3 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NW_016763985.1: 126-203 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUACACUAAUUGGACUGCCUUCUUCAGGAUGAGGUAGUAAGUUGUAUUGUUGUGGGGGUGUUUUAUUUCCCCAAAUUAGGAGAUAACUAUACAGCUUACUGCCUUCCCUGCGGCAUGGUAUUUUAAUUCUGUAUGAG
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Structure
        10         20         30        40        50        60         
CCUACACUAAUUGGACU-   UU-| U    AU                 U   GUGGGGGUGUUUUAUU 
                  GCC   CU CAGG  GAGGUAGUAAGUUGUAU GUU                \
                  UGG   GG GUCC  UUCCGUCAUUCGACAUA CAA                U
GAGUAUGUCUUAAUUUUA   UAC^ C    C-                 U   UAGAGGAUUAAACCCC 
      130       120       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Let-7-P2b3c_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAAGUUGUAUUGUU -22
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Star sequence

Xla-Let-7-P2b3c_3p*
mirBase accessionNone
Sequence 
57- CUAUACAGCUUACUGCCUUCC -78
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