MirGeneDB 3.0

58 microRNA genes with node of origin A.suum

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Asu-Bantam-o1	asu-mir-81a	BANTAM	GAGAUCA	None	MIMAT0021474	Scaffold406	346015	346076	+	A.suum	Protostomia		No			1
Asu-Bantam-o2	asu-mir-81c	BANTAM	GAGAUCA	MIMAT0021421	MIMAT0021422	Scaffold20	144531	144589	+	A.suum	Protostomia		No			1
Asu-Bantam-o3	asu-mir-81b	BANTAM	GAGAUCA	MIMAT0021419	MIMAT0021420	Scaffold20	148295	148353	+	A.suum	Protostomia		No		1	1
Asu-Mir-2-o6	None	MIR-2	ACGGCAA	None	None	Scaffold800	124302	124361	+	A.suum	Protostomia		No
Asu-Mir-2-o7a	asu-mir-2a	MIR-2	AUCACAG	MIMAT0021425	MIMAT0021426	Scaffold65	285241	285298	+	A.suum	Protostomia		No
Asu-Mir-2-o7b	None	MIR-2	AUCACAG	None	None	Scaffold2380	4192	4249	+	A.suum	Protostomia		No			1
Asu-Mir-2-o8	asu-mir-2b	MIR-2	AUCACAG	MIMAT0021427	MIMAT0021428	Scaffold287	267253	267310	-	A.suum	Protostomia		No	1		1
Asu-Mir-2-o9	asu-mir-43d	MIR-2	AUCACAG	MIMAT0021433	MIMAT0021434	Scaffold187	163929	163989	-	A.suum	Protostomia		No			1
Asu-Mir-2-o10	asu-mir-43a	MIR-2	AUCACAG	MIMAT0021449	MIMAT0021450	Scaffold800	98049	98111	-	A.suum	Protostomia		No			1
Asu-Mir-2-o11a	asu-mir-43b	MIR-2	AUCACAG	MIMAT0021451	MIMAT0021452	Scaffold1765	14467	14524	+	A.suum	Protostomia		No
Asu-Mir-2-o11b	asu-mir-43c-1	MIR-2	AUCACAG	MIMAT0021453	MIMAT0021454	Scaffold919	52009	52066	+	A.suum	Protostomia		No	1		1
Asu-Mir-2-o11c	asu-mir-43c-2	MIR-2	AUCACAG	MIMAT0022671	MIMAT0021454	Scaffold1171	26596	26653	+	A.suum	Protostomia		No	1
Asu-Mir-2-o11d	asu-mir-43e	MIR-2	AUCACAG	MIMAT0021435	MIMAT0021436	Scaffold1765	14913	14972	+	A.suum	Protostomia		No			1
Asu-Mir-9-o17	asu-mir-9	MIR-9	CUUUGGU	MIMAT0021431	MIMAT0021432	Scaffold703	302189	302252	+	A.suum	Bilateria		No
Asu-Mir-9-o18	asu-mir-79	MIR-9	UAAAGCU	MIMAT0021472	MIMAT0021473	Scaffold46	2189447	2189505	-	A.suum	Bilateria		No		1	1
Asu-Mir-10-P2o3	asu-mir-100a-1	MIR-10	ACCCGUA	MIMAT0021487	MIMAT0021488	Scaffold883	122323	122381	+	A.suum	Eumetazoa		Unknown		1
Asu-Mir-10-P2o4	asu-mir-100c	MIR-10	ACCCGUA	MIMAT0021491	MIMAT0021492	Scaffold883	121212	121269	+	A.suum	Eumetazoa		No
Asu-Mir-10-P2o5	asu-mir-100a-2	MIR-10	ACCCGUA	MIMAT0021487	MIMAT0022835	Scaffold488	2112876	2112933	-	A.suum	Eumetazoa		No			1
Asu-Mir-10-P2o6	asu-mir-100b	MIR-10	ACCCGUA	MIMAT0021489	MIMAT0021490	Scaffold28	351836	351896	+	A.suum	Eumetazoa		No	1
Asu-Mir-10-P2o7	asu-mir-100d	MIR-10	ACCCGUA	MIMAT0021493	MIMAT0021494	C4124442	39	95	-	A.suum	Eumetazoa		Unknown			1
Asu-Mir-10-P2o8	asu-mir-100e	MIR-10	ACCUGAG	MIMAT0021542	MIMAT0021543	Scaffold68	233217	233273	-	A.suum	Eumetazoa		Unknown	1		1
Asu-Mir-36-o27	asu-mir-36a	MIR-36	CACCGGG	MIMAT0021439	MIMAT0021440	Scaffold561	396486	396545	-	A.suum	Protostomia		No	1
Asu-Mir-36-o28	asu-mir-36b	MIR-36	CACCGGG	MIMAT0021441	MIMAT0021442	Scaffold800	98613	98672	-	A.suum	Protostomia		No
Asu-Mir-36-o29 V	asu-mir-36c	MIR-36	CACCGGG	MIMAT0021443	MIMAT0021444	trace_ANBK02000028	101	160	+	A.suum	Protostomia	2	No
Asu-Mir-36-o30	asu-mir-36d	MIR-36	CACCGGG	MIMAT0021445	MIMAT0021446	Scaffold730	215044	215101	+	A.suum	Protostomia		No	1
Asu-Mir-36-o31	asu-mir-36f	MIR-36	CACCGGG	MIMAT0021546	MIMAT0021547	trace_ANBK02000051	101	169	+	A.suum	Protostomia		No
Asu-Mir-36-o32	asu-mir-5348	MIR-36	CACCGGG	MIMAT0021548	MIMAT0021549	Scaffold123	289846	289901	-	A.suum	Protostomia		No			1
Asu-Mir-54-o1	asu-mir-56	MIR-54	ACCCGUA	None	MIMAT0021463	C4628901	434	493	+	A.suum	Chromadorea		No			1
Asu-Mir-54-o2	asu-mir-5358a	MIR-54	ACCCGUA	MIMAT0021578	MIMAT0021579	Scaffold882	8167	8228	+	A.suum	Chromadorea		No
Asu-Mir-54-o3	asu-mir-5358b	MIR-54	CAUGUUG	MIMAT0021598	MIMAT0021599	Scaffold882	12067	12126	+	A.suum	Chromadorea		No
Asu-Mir-87-o3	asu-mir-87a	MIR-87	UGAGCAA	MIMAT0021481	MIMAT0021482	Scaffold253	297752	297814	-	A.suum	Protostomia		No			1
Asu-Mir-87-o4	asu-mir-87b	MIR-87	UGAGCAA	MIMAT0021483	MIMAT0021484	Scaffold299	383882	383941	-	A.suum	Protostomia		No
Asu-Mir-279-o22	asu-mir-44a	MIR-279	GACUAGA	MIMAT0021455	MIMAT0021456	Scaffold800	97897	97956	-	A.suum	Protostomia		No
Asu-Mir-279-o23	asu-mir-44b	MIR-279	CUGGAUG	MIMAT0021564	MIMAT0021565	Scaffold187	164312	164371	-	A.suum	Protostomia		No			1
Asu-Mir-279-o24	asu-mir-279a	MIR-279	GACUAGA	MIMAT0021511	MIMAT0021512	Scaffold287	267836	267891	-	A.suum	Protostomia		No	1		1
Asu-Mir-279-o25	asu-mir-279b	MIR-279	GACUAGA	MIMAT0021513	MIMAT0021514	Scaffold1765	14642	14699	+	A.suum	Protostomia		No
Asu-Mir-279-o26	asu-mir-279c	MIR-279	GACUAGA	MIMAT0021515	MIMAT0021516	Scaffold919	52254	52311	+	A.suum	Protostomia		No	1
Asu-Mir-5342	asu-mir-5342	MIR-5342	AAUAUCA	MIMAT0021517	MIMAT0021518	Scaffold122	2401266	2401323	-	A.suum	A.suum		No
Asu-Mir-5345	asu-mir-5345a	MIR-5345	AGGCACU	MIMAT0021537	MIMAT0021538	Scaffold68	235543	235601	+	A.suum	A.suum		No
Asu-Mir-5347	asu-mir-5347	MIR-5347	GACGGUG	MIMAT0021544	MIMAT0021545	Scaffold590	33719	33778	+	A.suum	A.suum		No
Asu-Mir-5350-P1	asu-mir-5350a	MIR-5350	UUGGCAC	MIMAT0021552	MIMAT0021553	Scaffold730	214863	214919	+	A.suum	A.suum		No		1
Asu-Mir-5350-P2	asu-mir-5350b	MIR-5350	UUGGCAC	MIMAT0021554	MIMAT0021555	Scaffold1190	38567	38623	-	A.suum	A.suum		No			1
Asu-Mir-5350-P3	asu-mir-5350c	MIR-5350	UUGGCAC	MIMAT0021556	MIMAT0021557	Scaffold1190	38272	38328	-	A.suum	A.suum		No
Asu-Mir-5350-P4	asu-mir-5350d	MIR-5350	UUGGCAC	MIMAT0021558	MIMAT0021559	Scaffold123	289536	289593	-	A.suum	A.suum		No
Asu-Mir-5350-P5	asu-mir-5351	MIR-5350	UUGGCAC	MIMAT0021560	MIMAT0021561	Scaffold95	1540197	1540253	+	A.suum	A.suum		No
Asu-Mir-5350-P6	asu-mir-5354	MIR-5350	CGGGUAU	MIMAT0021568	MIMAT0021569	Scaffold800	97547	97610	-	A.suum	A.suum		No
Asu-Mir-5353	asu-mir-5353	MIR-5353	CAUUGCG	MIMAT0021566	MIMAT0021567	Scaffold618	101798	101858	+	A.suum	A.suum		No			1
Asu-Mir-5355	asu-mir-5355	MIR-5355	GAACACC	MIMAT0021570	MIMAT0021571	Scaffold144	78567	78627	-	A.suum	A.suum		No
Asu-Mir-5357	asu-mir-5357	MIR-5357	AUGGACA	MIMAT0021576	MIMAT0021577	Scaffold420	529272	529329	-	A.suum	A.suum		No			1
Asu-Mir-5359	asu-mir-5359	MIR-5359	CUGGGAU	MIMAT0021580	MIMAT0021581	Scaffold3	295177	295234	+	A.suum	A.suum		No
Asu-Mir-5360	asu-mir-5360	MIR-5360	CGAAUCG	MIMAT0021582	MIMAT0021583	Scaffold151	281104	281162	-	A.suum	A.suum		No	1	1	1
Asu-Mir-5361	asu-mir-5361	MIR-5361	GGGAUAU	MIMAT0021584	MIMAT0021585	Scaffold651	369892	369951	+	A.suum	A.suum		No
Asu-Mir-5363	asu-mir-5363	MIR-5363	UGGGCAA	MIMAT0021588	MIMAT0021589	Scaffold89	139857	139915	-	A.suum	A.suum		Yes		1	1
Asu-Mir-5364	asu-mir-5364	MIR-5364	GAGGUAU	MIMAT0021590	MIMAT0021591	Scaffold392	63851	63910	-	A.suum	A.suum		No			1
Asu-Novel-1	None	ASU-NOVEL-1	CUUCGAC	None	None	Scaffold122	2002114	2002167	+	A.suum	A.suum		No
Asu-Novel-2	None	ASU-NOVEL-2	UUUGAUC	None	None	Scaffold142	201065	201123	-	A.suum	A.suum		No
Asu-Novel-3	None	ASU-NOVEL-3	GGGGUAC	None	None	Scaffold614	10332	10387	-	A.suum	A.suum		No
Asu-Novel-4	None	ASU-NOVEL-4	ACAGUCU	None	None	Scaffold656	229799	229855	+	A.suum	A.suum		No

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