| MirGeneDB ID | Asu-Mir-5361 |
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| Family name |
MIR-5361 (all species) |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
asu-mir-5361
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A.suum
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| Node of Origin (family) |
A.suum
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold651: 369892-369951 [+]
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| Seed |
GGGAUAU |
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Precursor
(pre-Mir +30nt flank) |
UUCCUAGAGCGCUAUGCGGGUGCUCGAAUUUGGGAUAUCUUGGAAGGUUUCUCGGUUUUUAUGGGCGGAAAGCUUCCAUUUUGUCCCUGAUUCUAUCGCCACUUAUAAGCGAAUGCCCCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCCUAGAGCGCUAUGCG--| CUC U UCU G CGGUUU
GGUG GAAUU GGGAUA UGGAAG UUUCU U
CCGC CUUAG CCCUGU ACCUUC AAAGG U
GCCCCGUAAGCGAAUAUUCA^ UAU U UUU G CGGGUA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ce |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Mature sequence |
Asu-Mir-5361_5p |
| mirBase accession | MIMAT0021584 |
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| Sequence |
0- UGGGAUAUCUUGGAAGGUUUCU -22
Get sequence
|
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| Co-mature sequence |
Asu-Mir-5361_3p |
| mirBase accession | MIMAT0021585 |
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| Sequence |
38- AAAGCUUCCAUUUUGUCCCUGA -60
Get sequence
|
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