MirGeneDB 3.0

24 microRNA genes with node of origin C. picta

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Cpi-Mir-1677-o6	cpi-mir-1677a	MIR-1677	UGACUUC	MIMAT0037920	MIMAT0037921	JH584713	4439235	4439298	-	C. picta	Diapsida		No
Cpi-Mir-1677-o7	cpi-mir-1677b	MIR-1677	CCAGAGC	MIMAT0037922	MIMAT0037923	JH584649	363127	363184	-	C. picta	Diapsida		No			1
Cpi-Mir-1677-o8	cpi-mir-1677h	MIR-1677	CUAAAUU	MIMAT0037932	MIMAT0037933	JH584557	925315	925376	+	C. picta	Diapsida		No	1
Cpi-Mir-1677-P1a1	cpi-mir-1677g-1	MIR-1677	GACUUCA	None	MIMAT0037931	JH584677	2397667	2397724	+	C. picta	Diapsida		No
Cpi-Mir-1677-P1a2	cpi-mir-1677g-1	MIR-1677	GACUUCA	None	MIMAT0037931	JH584677	2398652	2398709	+	C. picta	Diapsida		No
Cpi-Mir-1677-P1b	cpi-mir-1677g-2	MIR-1677	GACUUCA	None	MIMAT0037931	JH584486	3339783	3339839	+	C. picta	Diapsida		No
Cpi-Mir-9578	cpi-mir-9578	MIR-9578	GGGACAC	MIMAT0037950	MIMAT0037951	JH584745	132134	132194	+	C. picta	C. picta		No
Cpi-Mir-9579	cpi-mir-9579	MIR-9579	UCUCUUU	MIMAT0037952	MIMAT0037953	JH584890	647206	647262	+	C. picta	C. picta		No	1		1
Cpi-Mir-9580	cpi-mir-9580	MIR-9580	AUGGGGA	MIMAT0037956	MIMAT0037957	JH584581	6053420	6053478	+	C. picta	C. picta		No			1
Cpi-Mir-9581	cpi-mir-9581	MIR-9581	ACGCCGA	MIMAT0037958	MIMAT0037959	JH584390	702199	702260	-	C. picta	C. picta		No			1
Cpi-Mir-9583	cpi-mir-9583	MIR-9583	AGCAGUC	MIMAT0037962	MIMAT0037963	JH584564	1237382	1237441	+	C. picta	C. picta		No		1
Cpi-Mir-9584	cpi-mir-9584	MIR-9584	UGUGACU	MIMAT0037964	MIMAT0037965	JH584684	2537512	2537569	-	C. picta	C. picta		No
Cpi-Mir-9585	cpi-mir-9585	MIR-9585	ACCGAUC	MIMAT0037966	MIMAT0037967	JH584682	9632185	9632250	-	C. picta	C. picta		No
Cpi-Mir-9586	cpi-mir-9586	MIR-9586	UGAUCCU	MIMAT0037968	MIMAT0037969	JH584521	616846	616904	+	C. picta	C. picta		No			1
Cpi-Mir-9587	cpi-mir-9587	MIR-9587	AGCAAAG	MIMAT0037970	MIMAT0037971	JH584446	954091	954147	+	C. picta	C. picta		No			1
Cpi-Mir-9588	cpi-mir-9588	MIR-9588	CUCAGAU	MIMAT0037972	MIMAT0037973	JH584750	4027645	4027702	+	C. picta	C. picta		No			1
Cpi-Mir-9589	cpi-mir-9589	MIR-9589	CAGGUGG	MIMAT0037974	MIMAT0037975	JH584690	4792149	4792205	+	C. picta	C. picta		No	1		1
Cpi-Mir-9590	cpi-mir-9590	MIR-9590	GUGGUGC	MIMAT0037976	MIMAT0037977	JH584466	1371325	1371390	-	C. picta	C. picta		No
Cpi-Mir-9592	cpi-mir-9592	MIR-9592	ACCUUAU	MIMAT0037980	MIMAT0037981	JH584868	1390555	1390614	+	C. picta	C. picta		No
Cpi-Mir-9593	cpi-mir-9593	MIR-9593	GGUGUAA	MIMAT0037982	MIMAT0037983	JH584667	1013393	1013452	+	C. picta	C. picta		No			1
Cpi-Mir-9594	cpi-mir-9594	MIR-9594	CAGUGUA	MIMAT0037984	MIMAT0037985	JH584595	317716	317776	-	C. picta	C. picta		No
Cpi-Mir-9595	cpi-mir-9595	MIR-9595	CUGCUAC	MIMAT0037986	MIMAT0037987	JH584479	1470293	1470352	+	C. picta	C. picta		No	1
Cpi-Mir-9597	cpi-mir-9597	MIR-9597	AAAUAUC	MIMAT0037990	MIMAT0037991	JH584680	5293575	5293634	+	C. picta	C. picta		No			1
Cpi-Novel-1	cpi-mir-1729	CPI-NOVEL-1	AGCCCUU	MIMAT0037954	MIMAT0037955	JH584702	3225755	3225811	-	C. picta	C. picta		No	1		1

(red - mature/co-mature, blue - star)

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