| MirGeneDB ID | Cpi-Mir-9583 |
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| Family name |
MIR-9583 (all species) |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9583
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584564: 1237382-1237441 [+]
UCSC
Ensembl
|
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| Seed |
AGCAGUC |
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Precursor
(pre-Mir +30nt flank) |
CCAGGGCCACUGCUUGGGAUGGAUGGGAGCCAGCAGUCGGAGAAGAAGAGACGGUGACUAACCUCCGUAACUUGUUCUUCGAGAUGUUGCUCACGUCCAGUCCAUGACCCGCCCUCCAUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCAGGGCCACUGCUUGGGA--| G C G- G AG GUGAC
UGGAUG GAGC AGCA UCGGAGAA AAG ACG U
ACCUGC CUCG UUGU AGCUUCUU UUC UGC A
CUACCUCCCGCCCAGUACCUG^ A - AG G AA CUCCA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
|
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| Mature sequence |
Cpi-Mir-9583_5p |
| mirBase accession | MIMAT0037962 |
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| Sequence |
0- CAGCAGUCGGAGAAGAAGAGACG -23
Get sequence
|
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| Co-mature sequence |
Cpi-Mir-9583_3p |
| mirBase accession | MIMAT0037963 |
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| Sequence |
37- UAACUUGUUCUUCGAGAUGUUGC -60
Get sequence
|
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