MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-9585

Family name MIR-9585 (all species)
Seed ACCGAUC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-9585
Paralogues
Orthologues
Node of Origin (locus) C. picta
Node of Origin (family) C. picta
Genome context
(chrPic1)
JH584682: 9632185-9632250 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGAACCGAACUGCUCUCCGGAGUUGGGGCACCGAUCGUUGGCGACUCAGGCUCCUCCAUGGGAGCAGUACCCUGAGUCGCCAACAAUCGGUGCCUCAACUCGGAGACCUCGGAGUCGGAGGCAG
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Structure
        10           20        30        40        50        60  
CAAGAACCGAACUGCUC---|   G               C              CUCCUCCAU 
                    UCCG AGUUGGGGCACCGAU GUUGGCGACUCAGG         G
                    AGGC UCAACUCCGUGGCUA CAACCGCUGAGUCC         G
GACGGAGGCUGAGGCUCCAG^   -               A              CAUGACGAG 
    120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-9585_5p

mirBase accessionMIMAT0037966
Sequence
0- CACCGAUCGUUGGCGACUCAGG -22
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Star sequence

Cpi-Mir-9585_3p*

mirBase accessionMIMAT0037967
Sequence
44- UGAGUCGCCAACAAUCGGUGCC -66
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