| MirGeneDB ID | Cpi-Mir-9585 |
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| Family name |
MIR-9585 (all species) |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9585
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
C. picta
|
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584682: 9632185-9632250 [-]
UCSC
Ensembl
|
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| Seed |
ACCGAUC |
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Precursor
(pre-Mir +30nt flank) |
CAAGAACCGAACUGCUCUCCGGAGUUGGGGCACCGAUCGUUGGCGACUCAGGCUCCUCCAUGGGAGCAGUACCCUGAGUCGCCAACAAUCGGUGCCUCAACUCGGAGACCUCGGAGUCGGAGGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAAGAACCGAACUGCUC---| G C CUCCUCCAU
UCCG AGUUGGGGCACCGAU GUUGGCGACUCAGG G
AGGC UCAACUCCGUGGCUA CAACCGCUGAGUCC G
GACGGAGGCUGAGGCUCCAG^ - A CAUGACGAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Cpi-Mir-9585_5p |
| mirBase accession | MIMAT0037966 |
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| Sequence |
0- CACCGAUCGUUGGCGACUCAGG -22
Get sequence
|
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| Star sequence |
Cpi-Mir-9585_3p* |
| mirBase accession | MIMAT0037967 |
|---|
| Sequence |
44- UGAGUCGCCAACAAUCGGUGCC -66
Get sequence
|
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