| MirGeneDB ID | Cpi-Mir-9592 |
|---|
| Family name |
MIR-9592 (all species) |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9592
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
C. picta
|
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584868: 1390555-1390614 [+]
UCSC
Ensembl
|
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| Seed |
ACCUUAU |
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Precursor
(pre-Mir +30nt flank) |
CUUUUUGUGCACAAGGAGUCUGAUCCUGCUGACCUUAUUCAGACAAAGCUCUUUUUGAUUCCAGUAGGAUUUUGCCUGAGUAGGGACUGCAGGGUUUGGCCCACAAGCAGUCGAUGCUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUUUUGUGCACAAGGA---| U UGA A CU UUUUGA
GUC GAUCCUGC CCUUAUUCAG CAAAG CU \
CGG UUGGGACG GGGAUGAGUC GUUUU GA U
UGUCGUAGCUGACGAACACC^ U UCA C AG UGACCU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Cpi-Mir-9592_5p |
| mirBase accession | MIMAT0037980 |
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| Sequence |
0- GACCUUAUUCAGACAAAGCUCU -22
Get sequence
|
|---|
| Co-mature sequence |
Cpi-Mir-9592_3p |
| mirBase accession | MIMAT0037981 |
|---|
| Sequence |
38- AUUUUGCCUGAGUAGGGACUGC -60
Get sequence
|
|---|
