MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-9592

Family name MIR-9592 (all species)
Seed ACCUUAU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-9592
Paralogues
Orthologues
Node of Origin (locus) C. picta
Node of Origin (family) C. picta
Genome context
(chrPic1)
JH584868: 1390555-1390614 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUUUGUGCACAAGGAGUCUGAUCCUGCUGACCUUAUUCAGACAAAGCUCUUUUUGAUUCCAGUAGGAUUUUGCCUGAGUAGGGACUGCAGGGUUUGGCCCACAAGCAGUCGAUGCUGU
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Structure
        10           20        30        40        50         
CUUUUUGUGCACAAGGA---|  U        UGA          A     CU  UUUUGA 
                    GUC GAUCCUGC   CCUUAUUCAG CAAAG  CU      \
                    CGG UUGGGACG   GGGAUGAGUC GUUUU  GA      U
UGUCGUAGCUGACGAACACC^  U        UCA          C     AG  UGACCU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-9592_5p

mirBase accessionMIMAT0037980
Sequence
0- GACCUUAUUCAGACAAAGCUCU -22
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Co-mature sequence

Cpi-Mir-9592_3p

mirBase accessionMIMAT0037981
Sequence
38- AUUUUGCCUGAGUAGGGACUGC -60
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