| MirGeneDB ID | Cpi-Mir-9594 |
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| Family name |
MIR-9594 (all species) |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9594
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
|
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584595: 317716-317776 [-]
UCSC
Ensembl
|
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| Seed |
CAGUGUA |
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Precursor
(pre-Mir +30nt flank) |
UUGUAGAAACGUAUUAGGCCAUAUCCUCAGACAGUGUAAAUCGGCAUAGCGCUUUUAACUUCAGUGGAUCUGUGCUAAUUUACAUCUGCCGAGGACCUGGCCCAUUAUACUGUAUGAUCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUGUAGAAACGUAUUAG---| UA AGA - CG CG UUUUAA
GCCA UCCUC CAG UGUAAAU GCAUAG C C
CGGU AGGAG GUC ACAUUUA CGUGUC G U
CUCUAGUAUGUCAUAUUACC^ CC CC- U AU UA GUGACU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
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| Mature sequence |
Cpi-Mir-9594_5p |
| mirBase accession | MIMAT0037984 |
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| Sequence |
0- ACAGUGUAAAUCGGCAUAGCGC -22
Get sequence
|
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| Co-mature sequence |
Cpi-Mir-9594_3p |
| mirBase accession | MIMAT0037985 |
|---|
| Sequence |
38- UCUGUGCUAAUUUACAUCUGCCG -61
Get sequence
|
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