MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-9595

Family name MIR-9595 (all species)
Seed CUGCUAC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-9595
Paralogues
Orthologues
Node of Origin (locus) C. picta
Node of Origin (family) C. picta
Genome context
(chrPic1)
JH584479: 1470293-1470352 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCAGCCAGUGGACUGCUCUCCUGGCACUCUGCUACACAGCCAGAGCGUCCGUGAGCCACAAGUGGAUGUCCCGGCUGUGAGUAGCGUGCAGGGAAUGGAGGAAGAACAACAAAAGGA
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Structure
        10        20          30        40        50          
GCAGCAGCCAGUGGACUGCUC--|   G    U     A       AGA     CGUGAGC 
                       UCCU GCAC CUGCU CACAGCC   GCGUC       \
                       AGGG CGUG GAUGA GUGUCGG   UGUAG       C
AGGAAAACAACAAGAAGGAGGUA^   A    C     -       CCC     GUGAACA 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-9595_5p

mirBase accessionMIMAT0037986
Sequence
0- UCUGCUACACAGCCAGAGCGUC -22
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Co-mature sequence

Cpi-Mir-9595_3p

mirBase accessionMIMAT0037987
Sequence
39- UGUCCCGGCUGUGAGUAGCGU -60
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