| MirGeneDB ID | Cpi-Mir-9581 |
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| Family name |
MIR-9581 (all species) |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9581
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584390: 702199-702260 [-]
UCSC
Ensembl
|
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| Seed |
ACGCCGA |
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Precursor
(pre-Mir +30nt flank) |
GAUCCCCUCUGCAUUCGGGGCCAGCGCCUCGGCUGGCGUACGUUGGCGUUGCUCCAUUGAAGCCAGCAGCUACGCCGACGUGAGCCAGCUGAUGCUCUGGCCCUCGGCAUCUCACGCGUUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAUCCCCUCUGCAUUCG--| C C G U UCCAUUG
GGGCCAG GC UCGGCUGGC UACGUUGGCGU GC A
CCCGGUC CG AGUCGACCG GUGCAGCCGCA CG A
AGUUGCGCACUCUACGGCU^ U U A U ACGACCG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Cpi-Mir-9581_5p* |
| mirBase accession | MIMAT0037958 |
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| Sequence |
0- GGCUGGCGUACGUUGGCGUUGC -22
Get sequence
|
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| Mature sequence |
Cpi-Mir-9581_3p |
| mirBase accession | MIMAT0037959 |
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| Sequence |
40- UACGCCGACGUGAGCCAGCUGA -62
Get sequence
|
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