MirGeneDB 2.1

41 microRNA genes with seed UGACAUC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cfa-Mir-489 cfa-mir-489 MIR-489 UGACAUC None MIMAT0009860 chr14 18980191 18980250 - Osteichthyes Osteichthyes No 1
Dno-Mir-489 dno-mir-489 MIR-489 UGACAUC MIMAT0047920 MIMAT0047921 JH574710 687595 687653 + Osteichthyes Osteichthyes No 1
Gja-Mir-489 None MIR-489 UGACAUC None None NW_015172008.1 309050 309109 - Osteichthyes Osteichthyes Unknown 1
Lch-Mir-489 None MIR-489 UGACAUC None None JH128944.1 60346 60405 - Osteichthyes Osteichthyes Unknown 1
Ocu-Mir-489 ocu-mir-489 MIR-489 UGACAUC MIMAT0048477 MIMAT0048478 chr10 35345574 35345633 + Osteichthyes Osteichthyes No 1
Pbv-Mir-489 pbv-mir-489 MIR-489 UGACAUC None MIMAT0039062 KE954238.1 44131 44190 - Osteichthyes Osteichthyes Unknown 1
Rno-Mir-489 rno-mir-489 MIR-489 UGACAUC MIMAT0017196 MIMAT0003113 chr4 28659547 28659606 - Osteichthyes Osteichthyes No 1
Sha-Mir-489 None MIR-489 UGACAUC None None GL849401.1 2379 2438 + Osteichthyes Osteichthyes No
Spt-Mir-489 None MIR-489 UGACAUC None None QEPC01001500.1 1527986 1528045 + Osteichthyes Osteichthyes Unknown 1
Aca-Mir-489-v1 aca-mir-489 MIR-489 UGACAUC MIMAT0021974 MIMAT0021975 6 21750917 21750976 - Osteichthyes Osteichthyes No 1
Ami-Mir-489-v1 ami-mir-489 MIR-489 UGACAUC MIMAT0038295 MIMAT0038296 NW_017712875.1 7248485 7248544 - Osteichthyes Osteichthyes No 1
Bta-Mir-489-v1 bta-mir-489 MIR-489 UGACAUC None MIMAT0009942 NC_037331.1 10822879 10822938 - Osteichthyes Osteichthyes No 1
Cli-Mir-489-v1 cli-mir-489 MIR-489 UGACAUC MIMAT0038656 MIMAT0038657 scaffold169 1811717 1811776 + Osteichthyes Osteichthyes No 1
Cpi-Mir-489-v1 cpi-mir-489 MIR-489 UGACAUC MIMAT0037897 MIMAT0037898 JH584862 1032484 1032543 - Osteichthyes Osteichthyes No 1
Dre-Mir-489-v1 dre-mir-489 MIR-489 UGACAUC None MIMAT0002940 chr19 40781190 40781248 - Osteichthyes Osteichthyes No 1
Gga-Mir-489-v1 gga-mir-489 MIR-489 UGACAUC MIMAT0026632 MIMAT0003365 2 23119351 23119410 - Osteichthyes Osteichthyes No 1
Gmo-Mir-489-v1 gmo-mir-489 MIR-489 UGACAUC MIMAT0044023 MIMAT0044024 contig308539 565 623 - Osteichthyes Osteichthyes No 1
Hsa-Mir-489-v1 hsa-mir-489 MIR-489 UGACAUC MIMAT0026605 MIMAT0002805 chr7 93483947 93484006 - Osteichthyes Osteichthyes No 1
Loc-Mir-489-v1 None MIR-489 UGACAUC None None LG11 37047670 37047728 - Osteichthyes Osteichthyes No 1
Mal-Mir-489-v1 None MIR-489 UGACAUC None None KV884831.1 258106 258164 - Osteichthyes Osteichthyes No 1
Mml-Mir-489-v1 mml-mir-489 MIR-489 UGACAUC MIMAT0026883 MIMAT0006349 chr3 118803471 118803530 - Osteichthyes Osteichthyes No 1
Tgu-Mir-489-v1 tgu-mir-489 MIR-489 UGACAUC MIMAT0027024 MIMAT0014618 2 24306046 24306105 - Osteichthyes Osteichthyes No 1
Tni-Mir-489-v1 tni-mir-489 MIR-489 UGACAUC None MIMAT0002939 21_random 1370454 1370512 + Osteichthyes Osteichthyes No 1
Xtr-Mir-489-v1 xtr-mir-489 MIR-489 UGACAUC None MIMAT0003642 chr6 24122623 24122682 - Osteichthyes Osteichthyes No 1
Xla-Mir-489-P1-v1 None MIR-489 UGACAUC None None NC_030734.1 29791980 29792039 - X. laevis Osteichthyes No 1
Xla-Mir-489-P2-v1 None MIR-489 UGACAUC None None NC_030735.1 24837837 24837895 - X. laevis Osteichthyes No 1
Aca-Mir-1662 aca-mir-1662 MIR-1662 UGACAUC MIMAT0021794 MIMAT0021795 6 2558253 2558313 + Tetrapoda Tetrapoda No
Ami-Mir-1662 ami-mir-1662 MIR-1662 UGACAUC MIMAT0038318 None NW_017707901.1 29917428 29917485 + Tetrapoda Tetrapoda Unknown 1
Cli-Mir-1662 cli-mir-1662 MIR-1662 UGACAUC MIMAT0038689 MIMAT0038690 scaffold450 607999 608056 - Tetrapoda Tetrapoda No 1
Cpi-Mir-1662 cpi-mir-1662 MIR-1662 UGACAUC MIMAT0037918 MIMAT0037919 JH584507 4701911 4701968 - Tetrapoda Tetrapoda Unknown 1
Gga-Mir-1662 gga-mir-1662 MIR-1662 UGACAUC MIMAT0007543 None 2 1911596 1911653 + Tetrapoda Tetrapoda No 1
Mun-Mir-1662 None MIR-1662 UGACAUC None None 1662_LR594632.1:58385579-58385722 44 101 - Tetrapoda Tetrapoda No 1
Pbv-Mir-1662 pbv-mir-1662 MIR-1662 UGACAUC MIMAT0039082 None KE959870.1 33153 33212 + Tetrapoda Tetrapoda Unknown 1 1
Spt-Mir-1662 None MIR-1662 UGACAUC None None QEPC01003143.1 2536524 2536580 - Tetrapoda Tetrapoda Unknown 1
Tgu-Mir-1662 tgu-mir-1662 MIR-1662 UGACAUC MIMAT0014459 None 2 3143419 3143476 - Tetrapoda Tetrapoda Unknown 1
Xtr-Mir-1662 None MIR-1662 UGACAUC None None chrUn_NW_016683472v1 318148 318205 + Tetrapoda Tetrapoda No 1
Xla-Mir-1662-P1 None MIR-1662 UGACAUC None None NC_030734.1 6906895 6906952 - X. laevis Tetrapoda No 1
Xla-Mir-1662-P2 None MIR-1662 UGACAUC None None NC_030735.1 5595665 5595722 - X. laevis Tetrapoda No 1
Gja-Mir-1662-P3 None MIR-1662 UGACAUC None None NW_015245705.1 305 364 + G. japonicus Tetrapoda Unknown 1
Gja-Mir-1662-P4 None MIR-1662 UGACAUC None None NW_015245705.1 305 364 + G. japonicus Tetrapoda Unknown 1
Sha-Novel-16-P27c None SHA-NOVEL-16 UGACAUC None None GL868171.1 6266 6326 + S. harrisii S. harrisii No 1 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all