MirGeneDB 3.0
44 microRNA genes with seed UGACAUC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Cfa-Mir-489 cfa-mir-489 MIR-489 UGACAUC None MIMAT0009860 chr14 18980191 18980250 - Osteichthyes Osteichthyes No 1
Cja-Mir-489 None MIR-489 UGACAUC None None CM021922.1 53363703 53363762 + Osteichthyes Osteichthyes Unknown 1
Dno-Mir-489 dno-mir-489 MIR-489 UGACAUC MIMAT0047920 MIMAT0047921 JH574710 687595 687653 + Osteichthyes Osteichthyes No 1
Eca-Mir-489 eca-mir-489 MIR-489 UGACAUC None MIMAT0012943 CM009151.1 37175527 37175587 - Osteichthyes Osteichthyes No 1
Gja-Mir-489 None MIR-489 UGACAUC None None NW_015172008.1 309050 309109 - Osteichthyes Osteichthyes Unknown 1
Laf-Mir-489 None MIR-489 UGACAUC None None GL010032.1 56015218 56015277 + Osteichthyes Osteichthyes Unknown 1
Lch-Mir-489 None MIR-489 UGACAUC None None JH128944.1 60346 60405 - Osteichthyes Osteichthyes Unknown 1
Ocu-Mir-489 ocu-mir-489 MIR-489 UGACAUC MIMAT0048477 MIMAT0048478 chr10 35345574 35345633 + Osteichthyes Osteichthyes No 1
Pab-Mir-489 None MIR-489 UGACAUC None None CM054685.2 82851746 82851805 + Osteichthyes Osteichthyes Unknown 1
Pbv-Mir-489 pbv-mir-489 MIR-489 UGACAUC None MIMAT0039062 KE954238.1 44131 44190 - Osteichthyes Osteichthyes Unknown 1
Rno-Mir-489 rno-mir-489 MIR-489 UGACAUC MIMAT0017196 MIMAT0003113 chr4 28659547 28659606 - Osteichthyes Osteichthyes No 1
Sha-Mir-489 None MIR-489 UGACAUC None None 1 137 196 + Osteichthyes Osteichthyes No
Spt-Mir-489 None MIR-489 UGACAUC None None QEPC01001500.1 1527986 1528045 + Osteichthyes Osteichthyes Unknown 1
Aca-Mir-489 V aca-mir-489 MIR-489 UGACAUC MIMAT0021974 MIMAT0021975 6 21750917 21750976 - Osteichthyes Osteichthyes 2 No 1
Ami-Mir-489 V ami-mir-489 MIR-489 UGACAUC MIMAT0038295 MIMAT0038296 NW_017712875.1 7248485 7248544 - Osteichthyes Osteichthyes 2 No 1
Bta-Mir-489 V bta-mir-489 MIR-489 UGACAUC None MIMAT0009942 NC_037331.1 10822879 10822938 - Osteichthyes Osteichthyes 3 No 1
Cli-Mir-489 V cli-mir-489 MIR-489 UGACAUC MIMAT0038656 MIMAT0038657 scaffold169 1811717 1811776 + Osteichthyes Osteichthyes 2 No 1
Cpi-Mir-489 V cpi-mir-489 MIR-489 UGACAUC MIMAT0037897 MIMAT0037898 JH584862 1032484 1032543 - Osteichthyes Osteichthyes 2 No 1
Dre-Mir-489 V dre-mir-489 MIR-489 UGACAUC None MIMAT0002940 chr19 40781190 40781248 - Osteichthyes Osteichthyes 2 No 1
Gga-Mir-489 V gga-mir-489 MIR-489 UGACAUC MIMAT0026632 MIMAT0003365 2 23119351 23119410 - Osteichthyes Osteichthyes 2 No 1
Gmo-Mir-489 V gmo-mir-489 MIR-489 UGACAUC MIMAT0044023 MIMAT0044024 contig308539 565 623 - Osteichthyes Osteichthyes 2 No 1
Hsa-Mir-489 V hsa-mir-489 MIR-489 UGACAUC MIMAT0026605 MIMAT0002805 chr7 93483947 93484006 - Osteichthyes Osteichthyes 2 No 1
Loc-Mir-489 V None MIR-489 UGACAUC None None LG11 37047670 37047728 - Osteichthyes Osteichthyes 2 No 1
Mal-Mir-489 V None MIR-489 UGACAUC None None KV884831.1 258106 258164 - Osteichthyes Osteichthyes 2 No 1
Mml-Mir-489 V mml-mir-489 MIR-489 UGACAUC MIMAT0026883 MIMAT0006349 CM014338.1 112622811 112622870 + Osteichthyes Osteichthyes 2 No 1
Tgu-Mir-489 V tgu-mir-489 MIR-489 UGACAUC MIMAT0027024 MIMAT0014618 2 24306046 24306105 - Osteichthyes Osteichthyes 2 No 1
Tni-Mir-489 V tni-mir-489 MIR-489 UGACAUC None MIMAT0002939 21_random 1370454 1370512 + Osteichthyes Osteichthyes 2 No 1
Xtr-Mir-489 V xtr-mir-489 MIR-489 UGACAUC None MIMAT0003642 chr6 24122623 24122682 - Osteichthyes Osteichthyes 2 No 1
Xla-Mir-489-P1 V None MIR-489 UGACAUC None None NC_030734.1 29791980 29792039 - X. laevis Osteichthyes 2 No 1
Xla-Mir-489-P2 V None MIR-489 UGACAUC None None NC_030735.1 24837837 24837895 - X. laevis Osteichthyes 2 No 1
Aca-Mir-1662 aca-mir-1662 MIR-1662 UGACAUC MIMAT0021794 MIMAT0021795 6 2558253 2558313 + Tetrapoda Tetrapoda No
Ami-Mir-1662 ami-mir-1662 MIR-1662 UGACAUC MIMAT0038318 None NW_017707901.1 29917428 29917485 + Tetrapoda Tetrapoda Unknown 1
Cli-Mir-1662 cli-mir-1662 MIR-1662 UGACAUC MIMAT0038689 MIMAT0038690 scaffold450 607999 608056 - Tetrapoda Tetrapoda No 1
Cpi-Mir-1662 cpi-mir-1662 MIR-1662 UGACAUC MIMAT0037918 MIMAT0037919 JH584507 4701911 4701968 - Tetrapoda Tetrapoda Unknown 1
Gga-Mir-1662 gga-mir-1662 MIR-1662 UGACAUC MIMAT0007543 None 2 1911596 1911653 + Tetrapoda Tetrapoda No 1
Mun-Mir-1662 None MIR-1662 UGACAUC None None LR594632.1 58385622 58385679 - Tetrapoda Tetrapoda No 1
Spt-Mir-1662 None MIR-1662 UGACAUC None None QEPC01003143.1 2536523 2536580 - Tetrapoda Tetrapoda Unknown 1
Tgu-Mir-1662 tgu-mir-1662 MIR-1662 UGACAUC MIMAT0014459 None 2 3143419 3143476 - Tetrapoda Tetrapoda Unknown 1
Xtr-Mir-1662 None MIR-1662 UGACAUC None None chrUn_NW_016683472v1 318148 318205 + Tetrapoda Tetrapoda No 1
Xla-Mir-1662-P1 None MIR-1662 UGACAUC None None NC_030734.1 6906895 6906952 - X. laevis Tetrapoda No 1
Xla-Mir-1662-P2 None MIR-1662 UGACAUC None None NC_030735.1 5595665 5595722 - X. laevis Tetrapoda No 1
Gja-Mir-1662-P3 None MIR-1662 UGACAUC None None NW_015245705.1 305 364 + G. japonicus Tetrapoda Unknown 1
Gja-Mir-1662-P4 None MIR-1662 UGACAUC None None NW_015176079.1 94305 94364 + G. japonicus Tetrapoda Unknown 1
Sha-Mir-12475-P27c None MIR-12475 UGACAUC None None GL868171.1 6266 6326 + S. harrisii Australidelphia No 1 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all