MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-1662-P1

Family name MIR-1662 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-1662-P2 
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Cpi-Mir-1662  Gga-Mir-1662  Mun-Mir-1662  Spt-Mir-1662  Tgu-Mir-1662  Xtr-Mir-1662 
Node of Origin (locus) X. laevis
Node of Origin (family) Tetrapoda
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030734.1: 6906895-6906952 [-] UCSC Ensembl
Seed UGACAUC
Precursor
(pre-Mir +30nt flank)		 
GGUCGUCAUACACAGCUGCGUUCUAUGGGUUUGACAUCAUCAUACUUGGGAUGUAUAACACAAAGUCCCAAGCAAGCUGAUGUUAGGCCCAAGAUGGCUGCCAUCCUGUCUCGCUAAA
Get precursor sequence
Structure
        10           20        30        40        50        
GGUCGUCAUACACAGCU---| GU   A              UCAUA        GUAUA 
                    GC  UCU UGGGUUUGACAUCA     CUUGGGAU     A
                    CG  AGA ACCCGGAUUGUAGU     GAACCCUG     C
AAAUCGCUCUGUCCUACCGU^ GU   -              CGAAC        AAACA 
      110       100         90        80        70        60
Deep sequencing
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Em
Mature sequence

Xla-Mir-1662-P1_5p
mirBase accessionNone
Sequence 
0- UUGACAUCAUCAUACUUGGGAU -22
Get sequence
Star sequence

Xla-Mir-1662-P1_3p*
mirBase accessionNone
Sequence 
36- CCCAAGCAAGCUGAUGUUAGGC -58
Get sequence