MirGeneDB 2.1
MirGeneDB ID

Tgu-Mir-1662

Family name MIR-1662 (all species)
Seed UGACAUC
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1662
Paralogues
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Cpi-Mir-1662  Gga-Mir-1662  Gja-Mir-1662-P3  Gja-Mir-1662-P4  Mun-Mir-1662  Pbv-Mir-1662  Spt-Mir-1662  Xla-Mir-1662-P1  Xla-Mir-1662-P2  Xtr-Mir-1662 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(TaeGut1_add)		 2: 3143419-3143476 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGACGUCGUGCGGAGCUGUGCUCGAUGGGCUUGACAUCAUCAUACUUGGGAUGUAUGACACGAAGUCCCAAGCAGGCUGAUGUCAGGCCCAAGAUGCCAUCCUGUGUCGGUUUCCCAU
Get precursor sequence
Structure
        10           20         30         40        50        
GGACGUCGUGCGGAGCU---|U  -  GA              -  AUA        GUAUG 
                    G GC UC  UGGGCUUGACAUCA UC   CUUGGGAU     A
                    C CG AG  ACCCGGACUGUAGU GG   GAACCCUG     C
UACCCUUUGGCUGUGUCCUA^-  U  A-              C  AC-        AAGCA 
      110       100          90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-1662_5p
mirBase accessionMIMAT0014459
Sequence 
0- UUGACAUCAUCAUACUUGGGAU -22
Get sequence
Star sequence

Tgu-Mir-1662_3p*
mirBase accessionNone
Sequence 
36- CCCAAGCAGGCUGAUGUCAGGC -58
Get sequence