Mir-1662

MirGeneDB ID

Aca-Mir-1662

Family name

MIR-1662 (all species)

Seed

UGACAUC

Species

Green anole lizard (Anolis carolinensis)

MiRBase ID

aca-mir-1662

Paralogues

Orthologues

Ami-Mir-1662 Cli-Mir-1662 Cpi-Mir-1662 Gga-Mir-1662 Gja-Mir-1662-P3 Gja-Mir-1662-P4 Mun-Mir-1662 Pbv-Mir-1662 Spt-Mir-1662 Tgu-Mir-1662 Xla-Mir-1662-P1 Xla-Mir-1662-P2 Xtr-Mir-1662

Node of Origin (locus)

Tetrapoda

Node of Origin (family)

Tetrapoda

Genome context
(anoCar2)

6: 2558253-2558313 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CGAUGUUGUGCAUAGCUACGCACUGUGGGCUUGACAUCAUCCUACUUGAGAUGUAAUGUAAUGCAAAGUCCCAAGUAGGUUGAUGUCUGGCCCAAGAUGGCUGCAGUCUUGCCAUGCCUUA

Get precursor sequence

Structure

        10         20         30        40        50          
CGAUGUUGUGCAUAGCUAC-  ACUG-|     U       U        A   GUAAUGU 
                    GC     UGGGCU GACAUCA CCUACUUG GAU       \
                    CG     ACCCGG CUGUAGU GGAUGAAC CUG       A
AUUCCGUACCGUUCUGACGU  GUAGA^     U       U        C   AAACGUA 
 .       110       100        90        80        70