MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-15-P2c

Family name MIR-15 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-15-P1a  Mmr-Mir-15-P1b  Mmr-Mir-15-P1c  Mmr-Mir-15-P1d  Mmr-Mir-15-P2a  Mmr-Mir-15-P2b  Mmr-Mir-15-P2d 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cja-Mir-15-P2c  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Eca-Mir-15-P2c  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Laf-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mml-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Neu-Mir-15-P2c-v1  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pab-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007693.1: 64876566-64876628 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2c)		 Mir-450-P3 CM007693.1: 64870489-64870546 [-] UCSC Ensembl
Mir-450-P2 CM007693.1: 64870652-64870708 [-] UCSC Ensembl
Mir-450-P1 CM007693.1: 64870824-64870880 [-] UCSC Ensembl
Mir-542-v1 CM007693.1: 64871640-64871698 [-] UCSC Ensembl
Mir-542-v2 CM007693.1: 64871641-64871697 [-] UCSC Ensembl
Mir-15-P2c CM007693.1: 64876566-64876628 [-] UCSC Ensembl
Mir-15-P1c CM007693.1: 64876908-64876966 [-] UCSC Ensembl
Seed AGCAGCG
Precursor
(pre-Mir +30nt flank)		 
GGACACGGUGCCCCACACUCAGCCGUGCCCUAGCAGCGGGAACAGUACUGCAGUGAGUGAUCAGUGCUCUGGAGUAUUGUUGCUGCUGCCAGGGUAAGUCUGGGACUCCUGCACCGGCCCACA
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Structure
        10          20        30        40        50        60 
GGACACGGUGCCCCACA--|    CCG      A       G         G   UGAGUGA 
                   CUCAG   UGCCCU GCAGCGG AACAGUACU CAG       \
                   GGGUC   AUGGGA CGUCGUC UUGUUAUGA GUC       U
ACACCCGGCCACGUCCUCA^    UGA      C       G         G   UCGUGAC 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-15-P2c_5p
mirBase accessionNone
Sequence 
0- UAGCAGCGGGAACAGUACUGCAG -23
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Star sequence

Mmr-Mir-15-P2c_3p*
mirBase accessionNone
Sequence 
40- GGAGUAUUGUUGCUGCUGCCAGG -63
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