MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-15-P1c

Family name MIR-15 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-424
Paralogues Mmr-Mir-15-P1a  Mmr-Mir-15-P1b  Mmr-Mir-15-P1d  Mmr-Mir-15-P2a  Mmr-Mir-15-P2b  Mmr-Mir-15-P2c  Mmr-Mir-15-P2d 
Orthologues Aca-Mir-15-P1c  Ami-Mir-15-P1c  Bta-Mir-15-P1c  Cfa-Mir-15-P1c  Cin-Mir-15-P1  Cja-Mir-15-P1c  Cli-Mir-15-P1c  Cmi-Mir-15-P1c  Cpi-Mir-15-P1c  Cpo-Mir-15-P1c  Dno-Mir-15-P1c  Eca-Mir-15-P1c  Ete-Mir-15-P1c  Gga-Mir-15-P1c  Gja-Mir-15-P1c  Hsa-Mir-15-P1c  Laf-Mir-15-P1c  Lch-Mir-15-P1c  Loc-Mir-15-P1c  Loc-Mir-15-P1c-as  Mdo-Mir-15-P1c-v1  Mml-Mir-15-P1c  Mmu-Mir-15-P1c-v1  Mun-Mir-15-P1c  Neu-Mir-15-P1c  Oan-Mir-15-P1c  Ocu-Mir-15-P1c  Pab-Mir-15-P1c  Pbv-Mir-15-P1c  Rno-Mir-15-P1c3  Rno-Mir-15-P1c4  Sha-Mir-15-P1c  Spt-Mir-15-P1c  Tgu-Mir-15-P1c  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xtr-Mir-15-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007693.1: 64876908-64876966 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1c)		 Mir-450-P3 CM007693.1: 64870489-64870546 [-] UCSC Ensembl
Mir-450-P2 CM007693.1: 64870652-64870708 [-] UCSC Ensembl
Mir-450-P1 CM007693.1: 64870824-64870880 [-] UCSC Ensembl
Mir-542-v1 CM007693.1: 64871640-64871698 [-] UCSC Ensembl
Mir-542-v2 CM007693.1: 64871641-64871697 [-] UCSC Ensembl
Mir-15-P2c CM007693.1: 64876566-64876628 [-] UCSC Ensembl
Mir-15-P1c CM007693.1: 64876908-64876966 [-] UCSC Ensembl
Seed AAAACGU
Precursor
(pre-Mir +30nt flank)		 
CGAUCCCCCUUCGUUGACUCCGAGGGGAUGCAGCAGCAAUUCAUGUUUUGAAGUGCUCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGAGGGGAAGGUAGAAGGUGGGAC
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Structure
        10         20         30        40        50         
CGAUCCCCCUUCGUUGA-   -|      A  C      AA             GUGCUC 
                  CUC CGAGGGG UG AGCAGC  UUCAUGUUUUGAA      \
                  GGG GCUCCCC AU UCGUCG  GAGUGCAAAACUU      U
CAGGGUGGAAGAUGGAAG   A^      C  A      CG             GGUAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-15-P1c_5p*
mirBase accessionMIMAT0049223
Sequence 
0- CAGCAGCAAUUCAUGUUUUGAA -22
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Mature sequence

Mmr-Mir-15-P1c_3p
mirBase accessionNone
Sequence 
37- CAAAACGUGAGGCGCUGCUAUA -59
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