MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-15-P1c

Family name MIR-15 (all species)
Seed AGCAGCA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-15-P1a  Mun-Mir-15-P1b  Mun-Mir-15-P2a  Mun-Mir-15-P2b  Mun-Mir-15-P2c 
Orthologues Aca-Mir-15-P1c  Ami-Mir-15-P1c  Bta-Mir-15-P1c  Cfa-Mir-15-P1c  Cin-Mir-15-P1  Cli-Mir-15-P1c  Cmi-Mir-15-P1c  Cpi-Mir-15-P1c  Cpo-Mir-15-P1c  Dno-Mir-15-P1c  Ete-Mir-15-P1c  Gga-Mir-15-P1c  Gja-Mir-15-P1c  Hsa-Mir-15-P1c  Lch-Mir-15-P1c  Loc-Mir-15-P1c  Loc-Mir-15-P1c-as  Mdo-Mir-15-P1c-v1  Mdo-Mir-15-P1c-v2  Mml-Mir-15-P1c  Mmu-Mir-15-P1c-v1  Mmu-Mir-15-P1c-v2  Mmu-Mir-15-P1c-v3  Oan-Mir-15-P1c  Ocu-Mir-15-P1c  Pbv-Mir-15-P1c  Rno-Mir-15-P1c3  Rno-Mir-15-P1c4  Sha-Mir-15-P1c  Spt-Mir-15-P1c  Tgu-Mir-15-P1c  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xtr-Mir-15-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(Mun_miRNA_loci)
15-P1c_LR594638.1:44462646-44462903: 101-158 [+]
Precursor
(pre-Mir +30nt flank)
UGAUUUCAGCAGGUGAGCUUUGGGGAGAUGUAGCAGCACAUCAUGGUUUGUUGUGACAAGGAGAUACAGACCAUUCUGAGCUGCCUCAUUUCCUCAAGGAAAAGGCAAGAGAAUAAGC
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Structure
        10          20        30        40        50        
UGAUUUCAGCAGGUGAG--|            UA     A  UC         UGUGAC 
                   CUUUGGGGAGAUG  GCAGC CA  AUGGUUUGU      A
                   GGAACUCCUUUAC  CGUCG GU  UACCAGACA      A
CGAAUAAGAGAACGGAAAA^            UC     A  CU         UAGAGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Mature sequence

Mun-Mir-15-P1c_5p

mirBase accessionNone
Sequence
0- UAGCAGCACAUCAUGGUUUGUU -22
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Star sequence

Mun-Mir-15-P1c_3p*

mirBase accessionNone
Sequence
36- CAGACCAUUCUGAGCUGCCUCA -58
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