MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-15-P1c

Family name MIR-15 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-15-P1a  Neu-Mir-15-P1d  Neu-Mir-15-P2a  Neu-Mir-15-P2b  Neu-Mir-15-P2c-v1  Neu-Mir-15-P2d 
Orthologues Aca-Mir-15-P1c  Ami-Mir-15-P1c  Bta-Mir-15-P1c  Cfa-Mir-15-P1c  Cin-Mir-15-P1  Cja-Mir-15-P1c  Cli-Mir-15-P1c  Cmi-Mir-15-P1c  Cpi-Mir-15-P1c  Cpo-Mir-15-P1c  Dno-Mir-15-P1c  Eca-Mir-15-P1c  Ete-Mir-15-P1c  Gga-Mir-15-P1c  Gja-Mir-15-P1c  Hsa-Mir-15-P1c  Laf-Mir-15-P1c  Lch-Mir-15-P1c  Loc-Mir-15-P1c  Loc-Mir-15-P1c-as  Mdo-Mir-15-P1c-v1  Mml-Mir-15-P1c  Mmr-Mir-15-P1c  Mmu-Mir-15-P1c-v1  Mun-Mir-15-P1c  Oan-Mir-15-P1c  Ocu-Mir-15-P1c  Pab-Mir-15-P1c  Pbv-Mir-15-P1c  Rno-Mir-15-P1c3  Rno-Mir-15-P1c4  Sha-Mir-15-P1c  Spt-Mir-15-P1c  Tgu-Mir-15-P1c  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xtr-Mir-15-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 56572597-56572654 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1c)		 Mir-15-P2c-v2 CM051820.1: 56572367-56572429 [-] UCSC Ensembl
Mir-15-P2c-v1 CM051820.1: 56572368-56572428 [-] UCSC Ensembl
Mir-15-P1c CM051820.1: 56572597-56572654 [-] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UCCGACUUCACAUGAAUCCUUUAGGAGAAAUAGCAGCACGCCAUGGUUUGUAGAGAUAAGGUGAUGCAAACCAUCGUGGGCUGUUACAUUUUCCUAAAGGGCAUUCCAACCUAGCCAG
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Structure
        10         20        30         40        50        
UCCGACUUCACAUGAAU-            A-|      A   C          GAGAU 
                  CCUUUAGGAGAA  UAGCAGC CGC AUGGUUUGUA     A
                  GGAAAUCCUUUU  AUUGUCG GUG UACCAAACGU     A
GACCGAUCCAACCUUACG            AC^      G   C          AGUGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-15-P1c_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGCCAUGGUUUGUA -22
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Co-mature sequence

Neu-Mir-15-P1c_3p
mirBase accessionNone
Sequence 
36- CAAACCAUCGUGGGCUGUUACA -58
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