MirGeneDB 2.1
MirGeneDB ID

Hme-Mir-9-o4

Family name MIR-9 (all species)
Seed UAAAGCU
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Mir-9-o1  Hme-Mir-9-o2  Hme-Mir-9-o3 
Orthologues Aca-Mir-9-P4  Ami-Mir-9-P4  Bfl-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cli-Mir-9-P4  Cmi-Mir-9-P4  Cpi-Mir-9-P4  Cte-Mir-9  Dre-Mir-9-P4a  Dre-Mir-9-P4b  Esc-Mir-9  Gga-Mir-9-P4  Gja-Mir-9-P4  Gmo-Mir-9-P4a  Gmo-Mir-9-P4b  Isc-Mir-9  Lan-Mir-9  Lch-Mir-9-P4  Lgi-Mir-9  Mal-Mir-9-P4a  Mal-Mir-9-P4b  Mdo-Mir-9-P4  Mun-Mir-9-P4  Npo-Mir-9  Oan-Mir-9-P4  Obi-Mir-9  Ovu-Mir-9  Pbv-Mir-9-P4  Pma-Mir-9-o4  Pmi-Mir-9  Sha-Mir-9-P4  Spt-Mir-9-P4  Spu-Mir-9  Sto-Mir-9-P4  Tgu-Mir-9-P4  Tni-Mir-9-P4a  Tni-Mir-9-P4b  Xbo-Mir-9  Xla-Mir-9-P4c  Xla-Mir-9-P4d  Xtr-Mir-9-P4 
Node of Origin (locus) H. melpomene
Node of Origin (family) Bilateria
Genome context
(Hmel_1)		 HE671859: 114241-114299 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCUUUUCAGCAUAUUUCACUUUUCGUGUAUUUGGUGAUUCAGCUUAUGACGUUACAAUAUACGUUAUAAAGCUGUUUCACUAAAUGUACGCGUAGUGAAAUUCAACAAAUGGUGUAA
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Structure
        10          20        30        40         50        
UUUCUUUUCAGCAUAUU--     UUU              UU    -|     CGUUAC 
                   UCACU   CGUGUAUUUGGUGA  CAGC UUAUGA      A
                   AGUGA   GCAUGUAAAUCACU  GUCG AAUAUU      A
AAUGUGGUAAACAACUUAA     UGC              UU    A^     GCAUAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-9-o4_5p*
mirBase accessionNone
Sequence 
0- AUUUGGUGAUUCAGCUUAUGA -21
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Mature sequence

Hme-Mir-9-o4_3p
mirBase accessionNone
Sequence 
37- AUAAAGCUGUUUCACUAAAUGU -59
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