MirGeneDB 3.0

MirGeneDB ID

Gpa-Mir-137

Family name

MIR-137 (all species)

Species

Tsetse fly (Glossina pallidipes)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-137-P11 Aae-Mir-137-P12 Aca-Mir-137-P1-v1 Aca-Mir-137-P3-v1 Aga-Mir-137 Agr-Mir-137 Ami-Mir-137-P1-v1 Ami-Mir-137-P3-v1 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bge-Mir-137-P13-v1 Bge-Mir-137-P14-v1 Bko-Mir-137 Bla-Mir-137-P15a Bla-Mir-137-P15b Bla-Mir-137-P15c Bpl-Mir-137 Bta-Mir-137-P1-v1 Cbr-Mir-137 Cel-Mir-137 Cfa-Mir-137-P1-v1 Cja-Mir-137-P1-v1 Cli-Mir-137-P1-v1 Cli-Mir-137-P3 Cmi-Mir-137-P1 Cpi-Mir-137-P1-v1 Cpi-Mir-137-P3-v1 Csc-Mir-137-P21 Csc-Mir-137-P22 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dno-Mir-137-P1-v1 Dpu-Mir-137 Dre-Mir-137-P1a-v1 Dre-Mir-137-P1b-v1 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Eca-Mir-137-P1 Efe-Mir-137-P4 Efe-Mir-137-P5 Efe-Mir-137-P6 Efe-Mir-137-P7 Efe-Mir-137-P8 Efe-Mir-137-P9 Efe-Mir-137-P10 Esc-Mir-137 Ete-Mir-137-P1-v1 Gga-Mir-137-P1-v1 Gga-Mir-137-P3-v1 Gja-Mir-137-P1-v1 Gja-Mir-137-P3 Gmo-Mir-137-P1b-v1 Gmo-Mir-137-P3a-v1 Gmo-Mir-137-P3b-v1 Hme-Mir-137 Hru-Mir-137 Hsa-Mir-137-P1-v1 Isc-Mir-137 Laf-Mir-137-P1 Lan-Mir-137 Lch-Mir-137-P1 Lch-Mir-137-P3 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Loc-Mir-137-P1-v1 Loc-Mir-137-P3-v1 Lpo-Mir-137-P16 Lpo-Mir-137-P17 Lpo-Mir-137-P18 Lpo-Mir-137-P19 Lpo-Mir-137-P20 Mal-Mir-137-P1b-v1 Mal-Mir-137-P3a-v1 Mal-Mir-137-P3b-v1 Mdo-Mir-137-P1-v1 Mdo-Mir-137-P3-v1 Mgi-Mir-137 Mml-Mir-137-P1-v1 Mmr-Mir-137-P1 Mmu-Mir-137-P1-v1 Mom-Mir-137 Mun-Mir-137-P1 Mun-Mir-137-P3 Neu-Mir-137-P1 Neu-Mir-137-P3 Oan-Mir-137-P1-v1 Oan-Mir-137-P3-v1 Obi-Mir-137 Ocu-Mir-137-P1-v1 Ofu-Mir-137 Ovu-Mir-137-v1 Pab-Mir-137-P1-v1 Pau-Mir-137 Pbv-Mir-137-P1-v1 Pbv-Mir-137-P3-v1 Pca-Mir-137 Pdu-Mir-137 Pfl-Mir-137-v1 Pma-Mir-137-o1 Pma-Mir-137-o2 Pma-Mir-137-o3 Pmi-Mir-137-v1 Pve-Mir-137 Rno-Mir-137-P1-v1 Rph-Mir-137 Sha-Mir-137-P1-v1 Sha-Mir-137-P3 Sko-Mir-137 Snu-Mir-137 Spt-Mir-137-P1 Spu-Mir-137 Sto-Mir-137-P1 Tca-Mir-137-v1 Tgu-Mir-137-P1-v1 Tni-Mir-137-P3b Tur-Mir-137 War-Mir-137 Xbo-Mir-137 Xla-Mir-137-P1 Xtr-Mir-137-P1

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GpalI1)

Scaffold10: 2419386-2419446 [+] Ensembl

Seed

Precursor
(pre-Mir +30nt flank)

AAUCGAACGGUAUAAGGACUUUGACUGGCCACGCGUAUUCUUAGGUUAUUAACAUGUCUACGAAAUUGUUAUUGCUUGAGAAUACACGUAGUUAACACGUCCGUAACAUCAAAAAGAAAAA

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Structure

        10        20            30        40        50        60
AAUCGAACGGUAUAAGGACUUU   ----|   C   C            UAU    AUGUCU 
                      GAC    UGGC ACG GUAUUCUUAGGU   UAAC      A
                      CUG    AUUG UGC CAUAAGAGUUCG   AUUG      C
AAAAAGAAAAACUACAAUGC--   CACA^   A   A            UU-    UUAAAG 
 .       110         100        90        80         70

Deep sequencing

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3' NTU

No

Motifs

CNNC at 3p(+17)

Tissue expression

-

+

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Star sequence

Gpa-Mir-137_5p*

mirBase accession

None

Sequence

0- ACGCGUAUUCUUAGGUUAUUAAC -23

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Mature sequence

Gpa-Mir-137_3p

mirBase accession

None

Sequence

39- UAUUGCUUGAGAAUACACGUAG -61

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