MirGeneDB 2.1

MirGeneDB ID

Efe-Mir-137-P6

Family name MIR-137 (all species)
Seed AUUGCUU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-137-P4  Efe-Mir-137-P5  Efe-Mir-137-P7  Efe-Mir-137-P8  Efe-Mir-137-P9  Efe-Mir-137-P10 
Orthologues Asu-Mir-137  Bfl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cgi-Mir-137  Cte-Mir-137  Dan-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Ebu-Mir-137  Esc-Mir-137  Hme-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Obi-Mir-137  Sko-Mir-137  Spu-Mir-137  Xbo-Mir-137 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)
Efet.01.140209: 563-625 [+]
Precursor
(pre-Mir +30nt flank)
GGAUGGAGGGUUUCGGAGGCAGCGUUAGUUACGUGCAUUCUUGGGUAAAUAAUAACAUUACAUGAAACUGUUAUUGCUUGAGAAUACACGUAGCUAACAAAUGCUCAACAACAACGACGACGA
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Structure
        10         20         30        40        50        60 
GGAUGGAGGGUUUCGGA-    GC-|           C     UG     A    AACAUUA 
                  GGCA   GUUAGUUACGUG AUUCU  GGUAA UAAU       C
                  UCGU   CAAUCGAUGCAC UAAGA  UCGUU AUUG       A
AGCAGCAGCAACAACAAC    AAA^           A     GU     -    UCAAAGU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Efe-Mir-137-P6_5p* (predicted)

mirBase accessionNone
Sequence
0- ACGUGCAUUCUUGGGUAAAUAAU -23
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Mature sequence

Efe-Mir-137-P6_3p

mirBase accessionNone
Sequence
41- UAUUGCUUGAGAAUACACGUAG -63
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