Mir-137-P5

MirGeneDB ID

Efe-Mir-137-P5

Family name

MIR-137 (all species)

Species

Common brandling worm (Eisenia fetida)

MiRBase ID

Paralogues

Efe-Mir-137-P4 Efe-Mir-137-P6 Efe-Mir-137-P7 Efe-Mir-137-P8 Efe-Mir-137-P9 Efe-Mir-137-P10

Orthologues

Aga-Mir-137 Agr-Mir-137 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bko-Mir-137 Bpl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gpa-Mir-137 Hme-Mir-137 Hru-Mir-137 Isc-Mir-137 Lan-Mir-137 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Mgi-Mir-137 Mom-Mir-137 Obi-Mir-137 Ofu-Mir-137 Pau-Mir-137 Pca-Mir-137 Pdu-Mir-137 Pve-Mir-137 Rph-Mir-137 Sko-Mir-137 Snu-Mir-137 Spu-Mir-137 Tur-Mir-137 War-Mir-137 Xbo-Mir-137

Node of Origin (locus)

E. fetida

Node of Origin (family)

Bilateria

Genome context
(Efe_combined)

scaffold2541-size46483: 10866-10927 [+]

Seed

AUUGCUU

Precursor
(pre-Mir +30nt flank)

GCCACUGCUGCUGCUGCUGCUUCGUUGUCUACGGGUAUUCUCAAGGGAAUAGCAUACCAUCUAAGACUGUUAUUGCUUGAGAAUACACGUAGUCAUGACAGCUGCCUCGACAUAAUCACACU

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Structure

        10          20         30        40        50        60 
GCCACUGCUGCUGCUGCU--   -|   U U     G           G  A    AUACCAU 
                    GCU UCGU G CUACG GUAUUCUCAAG GA UAGC       \
                    CGA AGUA C GAUGC CAUAAGAGUUC UU AUUG       C
UCACACUAAUACAGCUCCGU   C^   - U     A           G  -    UCAGAAU 
120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Star sequence

Efe-Mir-137-P5_5p*

mirBase accession

None

Sequence

0- ACGGGUAUUCUCAAGGGAAUAGC -23

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Mature sequence

Efe-Mir-137-P5_3p

mirBase accession

None

Sequence

40- UAUUGCUUGAGAAUACACGUAG -62

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