Mir-137-P20

MirGeneDB ID

Lpo-Mir-137-P20

Family name

MIR-137 (all species)

Species

Atlantic horseshoe crab (Limulus polyphemus)

MiRBase ID

Paralogues

Lpo-Mir-137-P16 Lpo-Mir-137-P17 Lpo-Mir-137-P18 Lpo-Mir-137-P19

Orthologues

Aga-Mir-137 Agr-Mir-137 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bko-Mir-137 Bpl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gpa-Mir-137 Hme-Mir-137 Hru-Mir-137 Isc-Mir-137 Lan-Mir-137 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Mgi-Mir-137 Mom-Mir-137 Obi-Mir-137 Ofu-Mir-137 Pau-Mir-137 Pca-Mir-137 Pdu-Mir-137 Pve-Mir-137 Rph-Mir-137 Sko-Mir-137 Snu-Mir-137 Spu-Mir-137 Tur-Mir-137 War-Mir-137 Xbo-Mir-137

Node of Origin (locus)

L. polyphemus

Node of Origin (family)

Bilateria

Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)

NW_013826396.1: 113-171 [-] Ensembl

Seed

UAUUGCU

Precursor
(pre-Mir +30nt flank)

AUGGGCUAAUUUUGCAGCUUGUGUCGUUGGGUGUGUUCUUAAGCUAAUGACACUAGUAUUGGUUGAUGUUAUUGCUCGAGAAUACACGUAGUGGCCAGGCGUUGUCAUCAUUCCAGUUA

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Structure

        10           20        30        40        50         
AUGGGCUAAUUUUGCAG---|   U       G         UA   U       CUAGUA 
                    CUUG GUCGUUG GUGUGUUCU  AGC AAUGACA      U
                    GGAC CGGUGAU CACAUAAGA  UCG UUAUUGU      U
AUUGACCUUACUACUGUUGC^   -       G         GC   -       AGUUGG 
       110       100         90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ge	Ge	So	So	So	To

Star sequence

Lpo-Mir-137-P20_5p* (predicted)

mirBase accession

None

Sequence

0- GUGUGUUCUUAAGCUAAUGACA -22

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Mature sequence

Lpo-Mir-137-P20_3p

mirBase accession

None

Sequence

38- UUAUUGCUCGAGAAUACACGU -59

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