MirGeneDB ID | Gga-Mir-137-P3-v1 |
Family name |
MIR-137 (all species) |
Seed |
UAUUGCU |
Species |
Chicken (Gallus gallus) |
MiRBase ID |
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Paralogues |
Gga-Mir-137-P1-v1
Gga-Mir-137-P1-v2
Gga-Mir-137-P3-v2
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Orthologues |
Aca-Mir-137-P3-v1
Aca-Mir-137-P3-v2
Ami-Mir-137-P3-v1
Ami-Mir-137-P3-v2
Asu-Mir-137
Bfl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cgi-Mir-137
Cli-Mir-137-P3
Cpi-Mir-137-P3-v1
Cpi-Mir-137-P3-v2
Cte-Mir-137
Dan-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Ebu-Mir-137
Esc-Mir-137
Gja-Mir-137-P3
Gmo-Mir-137-P3a-v1
Gmo-Mir-137-P3a-v2
Gmo-Mir-137-P3b-v1
Gmo-Mir-137-P3b-v2
Hme-Mir-137
Isc-Mir-137
Lan-Mir-137
Lch-Mir-137-P3
Lgi-Mir-137
Loc-Mir-137-P3-v1
Loc-Mir-137-P3-v2
Mal-Mir-137-P3a-v1
Mal-Mir-137-P3a-v2
Mal-Mir-137-P3b-v1
Mal-Mir-137-P3b-v2
Mdo-Mir-137-P3-v1
Mdo-Mir-137-P3-v2
Mun-Mir-137-P3
Oan-Mir-137-P3-v1
Oan-Mir-137-P3-v2
Obi-Mir-137
Pbv-Mir-137-P3-v1
Pbv-Mir-137-P3-v2
Pma-Mir-137-o3
Sha-Mir-137-P3
Sko-Mir-137
Spu-Mir-137
Tni-Mir-137-P3b
Xbo-Mir-137
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (Gallus_gallus.GRCg6a) |
18: 11367832-11367889 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCCGGAUGCCCCCCCCGCGCCCCGCGGUGACGGGUAUUCUCGGGCGGAUAACACGGCCGCGCUGUUAUUGCUGGAGAAUACGCGUAGCCGAGGGGACGCCCCGAGCCGGCCUCCUCG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCCCGGAUGCCCCCCCC- -| G G G G G CGGC
GCG CCCC CGGU ACG GUAUUCUC GGCG AUAACA \
CGC GGGG GCCG UGC CAUAAGAG UCGU UAUUGU C
GCUCCUCCGGCCGAGCCC A^ A A G G - CGCG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Ch |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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Star sequence |
Gga-Mir-137-P3-v1_5p* |
mirBase accession | None |
Sequence |
0- ACGGGUAUUCUCGGGCGGAUAACA -24
Get sequence
|
Mature sequence |
Gga-Mir-137-P3-v1_3p |
mirBase accession | None |
Sequence |
35- UUAUUGCUGGAGAAUACGCGUAG -58
Get sequence
|