MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-137-P3

Family name MIR-137 (all species)
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-137b
Paralogues Cpi-Mir-137-P1-v1 
Orthologues Aca-Mir-137-P3-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P3-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cli-Mir-137-P3  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gga-Mir-137-P3-v1  Gja-Mir-137-P3  Gmo-Mir-137-P3a-v1  Gmo-Mir-137-P3b-v1  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lch-Mir-137-P3  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P3-v1  Mal-Mir-137-P3a-v1  Mal-Mir-137-P3b-v1  Mdo-Mir-137-P3-v1  Mgi-Mir-137  Mom-Mir-137  Mun-Mir-137-P3  Neu-Mir-137-P3  Oan-Mir-137-P3-v1  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pbv-Mir-137-P3-v1  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o3  Pve-Mir-137  Rph-Mir-137  Sha-Mir-137-P3  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tni-Mir-137-P3b  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(chrPic1)		 JH584929: 32211-32269 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-137-P3-v1)		 Mir-137-P3-v2 JH584929: 32210-32270 [-] UCSC Ensembl
Mir-137-P3-v1 JH584929: 32211-32269 [-] UCSC Ensembl
Variant

Cpi-Mir-137-P3-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
GAACCCCCAGCCCACUAGCUCCCUUCGAUGACGGGUAUUCUUGGGUAGAUAAUACGGAUUGCGUUGUUAUUGCUUGAGAAUACGCGUAGCCGAGGGGAGAGUCGCUCAUCUGUGCCUCU
Get precursor sequence
Structure
        10          20        30        40        50         
GAACCCCCAGCCCACUAG--|        AUG   G       UG     A     CGGA 
                    CUCCCUUCG   ACG GUAUUCU  GGUAG UAAUA    U
                    GAGGGGAGC   UGC CAUAAGA  UCGUU AUUGU    U
UCUCCGUGUCUACUCGCUGA^        CGA   G       GU     -     UGCG 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Te Te Te To
Star sequence

Cpi-Mir-137-P3-v1_5p*
mirBase accessionNone
Sequence 
0- ACGGGUAUUCUUGGGUAGAUAAUA -24
Get sequence
Mature sequence

Cpi-Mir-137-P3-v1_3p
mirBase accessionMIMAT0037759
Sequence 
36- UUAUUGCUUGAGAAUACGCGUAG -59
Get sequence
Variant

Cpi-Mir-137-P3-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
GGAACCCCCAGCCCACUAGCUCCCUUCGAUGACGGGUAUUCUUGGGUAGAUAAUACGGAUUGCGUUGUUAUUGCUUGAGAAUACGCGUAGCCGAGGGGAGAGUCGCUCAUCUGUGCCUCUC
Get precursor sequence
Structure
        10          20        30        40        50        60
GGAACCCCCAGCCCACUAG--|        AUG   G       UG     A    ACGGA 
                     CUCCCUUCG   ACG GUAUUCU  GGUAG UAAU     U
                     GAGGGGAGC   UGC CAUAAGA  UCGUU AUUG     U
CUCUCCGUGUCUACUCGCUGA^        CGA   G       GU     -    UUGCG 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Te Te Te To
Star sequence

Cpi-Mir-137-P3-v2_5p*
mirBase accessionNone
Sequence 
0- GACGGGUAUUCUUGGGUAGAUAAU -24
Get sequence
Mature sequence

Cpi-Mir-137-P3-v2_3p
mirBase accessionMIMAT0037759
Sequence 
38- UAUUGCUUGAGAAUACGCGUAGC -61
Get sequence