Mir-137-P3

MirGeneDB ID

Sha-Mir-137-P3

Family name

MIR-137 (all species)

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-137-P1-v1

Orthologues

Aca-Mir-137-P3-v1 Aga-Mir-137 Agr-Mir-137 Ami-Mir-137-P3-v1 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bko-Mir-137 Bpl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cli-Mir-137-P3 Cpi-Mir-137-P3-v1 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gga-Mir-137-P3-v1 Gja-Mir-137-P3 Gmo-Mir-137-P3a-v1 Gmo-Mir-137-P3b-v1 Gpa-Mir-137 Hme-Mir-137 Hru-Mir-137 Isc-Mir-137 Lan-Mir-137 Lch-Mir-137-P3 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Loc-Mir-137-P3-v1 Mal-Mir-137-P3a-v1 Mal-Mir-137-P3b-v1 Mdo-Mir-137-P3-v1 Mgi-Mir-137 Mom-Mir-137 Mun-Mir-137-P3 Neu-Mir-137-P3 Oan-Mir-137-P3-v1 Obi-Mir-137 Ofu-Mir-137 Pau-Mir-137 Pbv-Mir-137-P3-v1 Pca-Mir-137 Pdu-Mir-137 Pma-Mir-137-o3 Pve-Mir-137 Rph-Mir-137 Sko-Mir-137 Snu-Mir-137 Spu-Mir-137 Tni-Mir-137-P3b Tur-Mir-137 War-Mir-137 Xbo-Mir-137

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(DEVIL_add)

GL841402.1: 267527-267585 [-] UCSC Ensembl

Seed

UAUUGCU

Precursor
(pre-Mir +30nt flank)

GCCCUCCCCACUGGCCGGCCUCCCGCAAGGACGGGUAUUCUUGGGUAGAUAAUACCGAUGGCGCUGUUAUUGCUUGAGAAUACACGUAGUCGAGGGGAGGCAUCUUCACCGACCCCUGA

Get precursor sequence

Structure

        10         20        30         40        50         
GCCCUCCCCACUGGCCG-       GCAAGG-|  G       UG     A     CCGA 
                  GCCUCCC       ACG GUAUUCU  GGUAG UAAUA    U
                  CGGAGGG       UGC CAUAAGA  UCGUU AUUGU    G
AGUCCCCAGCCACUUCUA       GAGCUGA^  A       GU     -     CGCG 
       110       100        90        80        70         60

Deep sequencing

3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Star sequence

Sha-Mir-137-P3_5p* (predicted)

mirBase accession

None

Sequence

0- ACGGGUAUUCUUGGGUAGAUAAUA -24

Get sequence

Mature sequence

Sha-Mir-137-P3_3p (predicted)

mirBase accession

None

Sequence

36- UUAUUGCUUGAGAAUACACGUAG -59

Get sequence