MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-137

Family name MIR-137 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Aga-Mir-137  Agr-Mir-137  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Mgi-Mir-137  Mom-Mir-137  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pca-Mir-137  Pdu-Mir-137  Pfl-Mir-137-v1  Pmi-Mir-137-v1  Pve-Mir-137  Rph-Mir-137  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tca-Mir-137-v1  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01002239.1: 63693-63752 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-137-v1)		 Mir-137-v2 RXHP01002239.1: 63692-63753 [+] Ensembl
Mir-137-v1 RXHP01002239.1: 63693-63752 [+] Ensembl
Variant

Ovu-Mir-137-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
CCACAGAGAAGCGAAAGAGCCGCGUUGACAACGGGUAUUCUUAGGUUAAUAAUACCAGACAGAGUUGUUAUUGCUUGAGAAUACACGUAAUCGACUGGUCUCUCCAAACAGCACAAAUCU
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Structure
        10           20        30        40        50          
CCACAGAGAAGCGAAAGA---|   C     CA   G            U      ACCAGA 
                     GCCG GUUGA  ACG GUAUUCUUAGGU AAUAAU      \
                     UGGU CAGCU  UGC CAUAAGAGUUCG UUAUUG      C
UCUAAACACGACAAACCUCUC^   -     AA   A            -      UUGAGA 
.       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-137-v1_5p*
mirBase accessionNone
Sequence 
0- ACGGGUAUUCUUAGGUUAAUAAU -23
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Mature sequence

Ovu-Mir-137-v1_3p
mirBase accessionNone
Sequence 
37- UUAUUGCUUGAGAAUACACGUAA -60
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Variant

Ovu-Mir-137-v2
Seed ACGGGUA
Precursor
(pre-Mir +30nt flank)		 
CCCACAGAGAAGCGAAAGAGCCGCGUUGACAACGGGUAUUCUUAGGUUAAUAAUACCAGACAGAGUUGUUAUUGCUUGAGAAUACACGUAAUCGACUGGUCUCUCCAAACAGCACAAAUCUU
Get precursor sequence
Structure
        10          20         30        40          50         
CCCACAGAGAAGCGAAA--   -   C     CA   G            --|   AAUACCA 
                   GAG CCG GUUGA  ACG GUAUUCUUAGGU  UAAU       G
                   CUC GGU CAGCU  UGC CAUAAGAGUUCG  AUUG       A
UUCUAAACACGACAAACCU   U   -     AA   A            UU^   UUGAGAC 
120       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Mature sequence

Ovu-Mir-137-v2_5p
mirBase accessionNone
Sequence 
0- AACGGGUAUUCUUAGGUUAAU -21
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Co-mature sequence

Ovu-Mir-137-v2_3p
mirBase accessionNone
Sequence 
39- UAUUGCUUGAGAAUACACGUAAU -62
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