MirGeneDB ID | Bla-Mir-137-P15c |
Family name |
MIR-137 (all species) |
Species |
European lancelet (Branchiostoma lanceolatum) |
MiRBase ID |
|
Paralogues |
Bla-Mir-137-P15a
Bla-Mir-137-P15b
|
Orthologues |
Aga-Mir-137
Agr-Mir-137
Asu-Mir-137
Ava-Mir-137
Bfl-Mir-137
Bko-Mir-137
Bpl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cte-Mir-137
Dan-Mir-137
Dgr-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Eba-Mir-137
Ebu-Mir-137
Esc-Mir-137
Gpa-Mir-137
Hme-Mir-137
Hru-Mir-137
Isc-Mir-137
Lan-Mir-137
Lgi-Mir-137
Lhy-Mir-137
Llo-Mir-137
Mgi-Mir-137
Mom-Mir-137
Obi-Mir-137
Ofu-Mir-137
Pau-Mir-137
Pca-Mir-137
Pdu-Mir-137
Pve-Mir-137
Rph-Mir-137
Sko-Mir-137
Snu-Mir-137
Spu-Mir-137
Tur-Mir-137
War-Mir-137
Xbo-Mir-137
|
Node of Origin (locus) |
B. lanceolatum
|
Node of Origin (family) |
Bilateria
|
Genome context (BraLan2) |
Sc0000001: 283506-283565 [-]
Ensembl
|
Seed |
AUUGCUU |
Precursor (pre-Mir +30nt flank) |
CCGUUGCAGAUACAUACGCACUGCUCGGUCACGGGUAUUCUUGGGUUAAUAAUAUACUUUUUCUAUAUUAUUGCUUGAGAAUACACGUGACUGAGUGUGUGUGAGACUCGACGCGGGAUG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCGUUGCAGAUACAUAC- -| G UG U AUACUU
GCAC UGCUCGGUCACG GUAUUCU GGU AAUAAU \
UGUG GUGAGUCAGUGC CAUAAGA UCG UUAUUA U
GUAGGGCGCAGCUCAGAG U^ A GU - UAUCUU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Bla-Mir-137-P15c_5p* |
mirBase accession | None |
Sequence |
0- ACGGGUAUUCUUGGGUUAAUAAU -23
Get sequence
|
Mature sequence |
Bla-Mir-137-P15c_3p |
mirBase accession | None |
Sequence |
38- UAUUGCUUGAGAAUACACGUGA -60
Get sequence
|