MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-137-P1

Family name MIR-137 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-137-P1-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P1-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Bta-Mir-137-P1-v1  Cbr-Mir-137  Cel-Mir-137  Cfa-Mir-137-P1-v1  Cja-Mir-137-P1-v1  Cli-Mir-137-P1-v1  Cmi-Mir-137-P1  Cpi-Mir-137-P1-v1  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dno-Mir-137-P1-v1  Dpu-Mir-137  Dre-Mir-137-P1a-v1  Dre-Mir-137-P1b-v1  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Eca-Mir-137-P1  Esc-Mir-137  Ete-Mir-137-P1-v1  Gga-Mir-137-P1-v1  Gja-Mir-137-P1-v1  Gmo-Mir-137-P1b-v1  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Hsa-Mir-137-P1-v1  Isc-Mir-137  Laf-Mir-137-P1  Lan-Mir-137  Lch-Mir-137-P1  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P1-v1  Mal-Mir-137-P1b-v1  Mdo-Mir-137-P1-v1  Mgi-Mir-137  Mml-Mir-137-P1-v1  Mmr-Mir-137-P1  Mmu-Mir-137-P1-v1  Mom-Mir-137  Mun-Mir-137-P1  Neu-Mir-137-P1  Oan-Mir-137-P1-v1  Obi-Mir-137  Ocu-Mir-137-P1-v1  Ofu-Mir-137  Pau-Mir-137  Pbv-Mir-137-P1-v1  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o1  Pve-Mir-137  Rno-Mir-137-P1-v1  Rph-Mir-137  Sha-Mir-137-P1-v1  Sko-Mir-137  Snu-Mir-137  Spt-Mir-137-P1  Spu-Mir-137  Sto-Mir-137-P1  Tgu-Mir-137-P1-v1  Tur-Mir-137  War-Mir-137  Xbo-Mir-137  Xla-Mir-137-P1  Xtr-Mir-137-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054679.2: 134890992-134891050 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-137-P1-v1)		 Mir-137-P1-v2 CM054679.2: 134890991-134891051 [+] UCSC Ensembl
Mir-137-P1-v1 CM054679.2: 134890992-134891050 [+] UCSC Ensembl
Variant

Pab-Mir-137-P1-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
GGCAGCUUGGUCCUCUGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACCAGCGGCAGGGGGGCAG
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Structure
        10          20        30        40        50         
GGCAGCUUGGUCCUCUG--|          UG   G           UG A     CGGA 
                   ACUCUCUUCGG  ACG GUAUUCUUGGG  G UAAUA    U
                   UGAGAGGAGCU  UGC CAUAAGAAUUC  U AUUGU    U
GACGGGGGGACGGCGACCA^          GA   G           GU -     UGCA 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-137-P1-v1_5p*
mirBase accessionNone
Sequence 
0- ACGGGUAUUCUUGGGUGGAUAAUA -24
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Mature sequence

Pab-Mir-137-P1-v1_3p
mirBase accessionNone
Sequence 
36- UUAUUGCUUAAGAAUACGCGUAG -59
Get sequence
Variant

Pab-Mir-137-P1-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
CGGCAGCUUGGUCCUCUGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACCAGCGGCAGGGGGGCAGC
Get precursor sequence
Structure
        10          20        30        40        50        60
CGGCAGCUUGGUCCUCUG--|          UG   G           UG A    ACGGA 
                    ACUCUCUUCGG  ACG GUAUUCUUGGG  G UAAU     U
                    UGAGAGGAGCU  UGC CAUAAGAAUUC  U AUUG     U
CGACGGGGGGACGGCGACCA^          GA   G           GU -    UUGCA 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-137-P1-v2_5p*
mirBase accessionNone
Sequence 
0- GACGGGUAUUCUUGGGUGGAUAAU -24
Get sequence
Mature sequence

Pab-Mir-137-P1-v2_3p
mirBase accessionNone
Sequence 
38- UAUUGCUUAAGAAUACGCGUAGU -61
Get sequence