MirGeneDB 3.0

78 Nautilus pompilius microRNA genes
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Npo-Mir-12509 None MIR-12509 UUGGCAU None None JACATO010000392.1 79417 79473 - Cephalopoda Cephalopoda Unknown 1 1 1
Npo-Mir-12508 None MIR-12508 GGUUUUG None None JACATO010002112.1 168366 168426 + Cephalopoda Cephalopoda Unknown
Npo-Mir-12507 None MIR-12507 UGGGGGA None None JACATO010000938.1 295052 295110 + Cephalopoda Cephalopoda Unknown
Npo-Mir-12506 None MIR-12506 AGGAUCU None None JACATO010000920.1 279226 279289 - Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12505 None MIR-12505 GGAACAU None None JACATO010001118.1 124861 124918 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12504 None MIR-12504 UUGCUAU None None JACATO010002266.1 27541 27599 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12503 None MIR-12503 GAACCAU None None JACATO010000303.1 1527089 1527147 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12502 None MIR-12502 GUUCCUG None None JACATO010000113.1 605057 605116 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12501 None MIR-12501 CGGUCAU None None JACATO010000106.1 1204687 1204744 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12500 None MIR-12500 UGUCGGC None None JACATO010000115.1 633204 633265 - Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12499 None MIR-12499 ACACCCG None None JACATO010000674.1 15031 15089 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12498 None MIR-12498 GGGGAUG None None JACATO010000106.1 248968 249029 - Cephalopoda Cephalopoda Unknown
Npo-Mir-2722 None MIR-2722 GGCGCCG None None JACATO010000642.1 35108 35165 + Mollusca Mollusca Unknown 1
Npo-Mir-2001 None MIR-2001 UGUGACC None None JACATO010000601.1 22889 22948 + Bilateria Bilateria Unknown 1 1
Npo-Mir-1994-P2 None MIR-1994 GAGACAG None None JACATO010001148.1 5202 5261 + Mollusca Lophotrochozoa Unknown 1
Npo-Mir-1994-P1 None MIR-1994 GAGACAG None None JACATO010001148.1 4537 4597 + Mollusca Lophotrochozoa Unknown 1
Npo-Mir-1993 None MIR-1993 AUUAUGC None None JACATO010000926.1 735993 736050 + Protostomia Protostomia Unknown 1
Npo-Mir-1992 None MIR-1992 CAGCAGU None None JACATO010001876.1 280757 280818 - Platytrochozoa Platytrochozoa Unknown 1
Npo-Mir-1990-P2 None MIR-1990 GGGACUA None None JACATO010001038.1 22720 22775 + Lophotrochozoa Lophotrochozoa Unknown 1
Npo-Mir-1989 None MIR-1989 CAGCUGU None None JACATO010000654.1 597583 597645 - Platytrochozoa Platytrochozoa Unknown 1
Npo-Mir-1986 None MIR-1986 GGAUUUC None None JACATO010001038.1 23639 23696 + Lophotrochozoa Lophotrochozoa Unknown 1
Npo-Mir-1984 None MIR-1984 GCCCUAU None None JACATO010001899.1 857317 857375 + Conchifera Conchifera Unknown 1
Npo-Mir-1175 None MIR-1175 GAGAUUC None None JACATO010002729.1 331909 331975 - Protostomia Protostomia Unknown 1
Npo-Mir-750 None MIR-750 CAGAUCU None None JACATO010002729.1 339392 339453 - Protostomia Protostomia Unknown 1
Npo-Mir-375 None MIR-375 UUGUUCG None None JACATO010000016.1 364667 364725 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-317 None MIR-317 GAACACA None None JACATO010000333.1 1089799 1089857 - Protostomia Protostomia Unknown 1 1
Npo-Mir-315 None MIR-315 UUUGAUU None None JACATO010002187.1 127806 127865 + Nephrozoa Nephrozoa Unknown 1
Npo-Mir-281 None MIR-281 AGGGAGC None None JACATO010000628.1 121138 121194 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-279 None MIR-279 GACUAGA None None JACATO010000310.1 2271 2328 - Protostomia Protostomia Unknown 1
Npo-Mir-278 None MIR-278 CGGUGGG None None JACATO010002233.1 187893 187953 - Bilateria Bilateria Unknown 1
Npo-Mir-277 None MIR-277 AAAUGCA None None JACATO010000333.1 1081096 1081159 - Protostomia Protostomia Unknown 1 1
Npo-Mir-252-P2 None MIR-252 UAAGUAC None None JACATO010000601.1 30774 30835 + Bilateria Bilateria Unknown 1
Npo-Mir-252-P1 None MIR-252 UAAGUAG None None JACATO010000601.1 25040 25096 + Bilateria Bilateria Unknown 1
Npo-Mir-242 None MIR-242 UGCGUAG None None JACATO010000680.1 783878 783934 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-216-P2d None MIR-216 AAUCUCA None None JACATO010001670.1 35814 35871 - Lophotrochozoa Nephrozoa Unknown 1 1
Npo-Mir-216-P2c None MIR-216 AAUCUCA None None JACATO010001670.1 36790 36848 - Lophotrochozoa Nephrozoa Unknown 1 1
Npo-Mir-210 None MIR-210 UUGUGCG None None JACATO010001359.1 311486 311542 - Bilateria Bilateria Unknown 1
Npo-Mir-193-P1 None MIR-193 ACUGGCC None None JACATO010001571.1 56052 56109 + Bilateria Bilateria Unknown 1 1
Npo-Mir-190 None MIR-190 GAUAUGU None None JACATO010000364.1 464357 464420 + Bilateria Bilateria Unknown 1
Npo-Mir-184 None MIR-184 GGACGGA None None JACATO010002440.1 60805 60863 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-153 None MIR-153 UGCAUAG None None JACATO010000312.1 1302753 1302811 + Bilateria Bilateria Unknown 1 1
Npo-Mir-133-P21 None MIR-133 UGGUCCC None None JACATO010002176.1 796507 796570 - N. pompilius Bilateria Unknown 1 1
Npo-Mir-133-P20 None MIR-133 UGGUCCC None None JACATO010002176.1 796507 796570 - N. pompilius Bilateria Unknown 1 1
Npo-Mir-124 None MIR-124 AAGGCAC None None JACATO010000641.1 1918964 1919023 - Bilateria Bilateria Unknown 1
Npo-Mir-96-P2 None MIR-96 UUGGCAC None None JACATO010002187.1 172147 172208 + Bilateria Bilateria Unknown
Npo-Mir-96-P1i None MIR-96 UUUGGCA None None JACATO010002216.1 3017 3076 - Mollusca Bilateria Unknown 1
Npo-Mir-96-P1h None MIR-96 UUGGCAC None None JACATO010000647.1 143522 143579 - Mollusca Bilateria Unknown 1 1
Npo-Mir-92-o50 None MIR-92 AUUGCAC None None JACATO010000364.1 528075 528134 + N. pompilius Bilateria Unknown
Npo-Mir-92-o49 None MIR-92 AUUGCAC None None JACATO010000364.1 514428 514486 + N. pompilius Bilateria Unknown 1
Npo-Mir-92-o48 None MIR-92 AUUGCAC None None JACATO010000364.1 507045 507103 + N. pompilius Bilateria Unknown 1
Npo-Mir-76 None MIR-76 UCGUUGU None None JACATO010001886.1 50169 50231 + Nephrozoa Nephrozoa Unknown
Npo-Mir-71 None MIR-71 GAAAGAC None None JACATO010000013.1 409153 409211 + Nephrozoa Nephrozoa Unknown 1 1
Npo-Mir-67 None MIR-67 CACAACC None None JACATO010002147.1 136709 136767 + Protostomia Protostomia Unknown 1
Npo-Mir-36 None MIR-36 CACCGGG None None JACATO010000666.1 32488 32550 + Protostomia Protostomia Unknown
Npo-Mir-34 None MIR-34 GGCAGUG None None JACATO010000333.1 1074717 1074775 - Bilateria Bilateria Unknown 1 1
Npo-Mir-33 None MIR-33 UGCAUUG None None JACATO010000339.1 1425657 1425714 - Bilateria Bilateria Unknown 1 1
Npo-Mir-31 None MIR-31 GGCAAGA None None JACATO010001526.1 8601 8658 + Bilateria Bilateria Unknown 1 1
Npo-Mir-29-P2 None MIR-29 AGCACCA None None JACATO010002735.1 648688 648745 - Bilateria Bilateria Unknown 1 1
Npo-Mir-29-P1 None MIR-29 AGCACCA None None JACATO010002735.1 665922 665985 - Bilateria Bilateria Unknown
Npo-Mir-22-P2 None MIR-22 AGCUGCC None None JACATO010000578.1 916031 916089 + Bilateria Bilateria Unknown
Npo-Mir-22-P1 None MIR-22 GCUGCCU None None JACATO010000578.1 913063 913120 + Bilateria Bilateria Unknown 1 1
Npo-Mir-12 None MIR-12 GAGUAUU None None JACATO010001670.1 34868 34925 - Protostomia Protostomia Unknown 1 1
Npo-Mir-10-P6 None MIR-10 UUACCCU None None JACATO010002743.1 273043 273102 - Neotrochozoa Eumetazoa Unknown
Npo-Mir-10-P2 None MIR-10 ACCCGUA None None JACATO010000333.1 1284096 1284153 - Bilateria Eumetazoa Unknown
Npo-Mir-10-P1 None MIR-10 ACCCUGU None None JACATO010000127.1 517834 517889 + Bilateria Eumetazoa Unknown
Npo-Mir-9 None MIR-9 CUUUGGU None None JACATO010000367.1 1247889 1247950 - Bilateria Bilateria Unknown 1
Npo-Mir-8 None MIR-8 AAUACUG None None JACATO010001881.1 1172212 1172273 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-7 None MIR-7 GGAAGAC None None JACATO010000367.1 670460 670519 + Bilateria Bilateria Unknown 1 1 1
Npo-Mir-2-P12 None MIR-2 AUCACAG None None JACATO010000013.1 409697 409758 + Lophotrochozoa Protostomia Unknown 1
Npo-Mir-2-o49 None MIR-2 CAUCAAA None None JACATO010000013.1 410469 410530 + Cephalopoda Protostomia Unknown
Npo-Mir-2-o48b None MIR-2 AUCACAG None None JACATO010000013.1 410351 410409 + N. pompilius Protostomia Unknown 1
Npo-Mir-2-o48a None MIR-2 AUCACAG None None JACATO010000013.1 410153 410212 + N. pompilius Protostomia Unknown 1
Npo-Mir-2-o47 None MIR-2 CACAGCC None None JACATO010000013.1 409822 409878 + Cephalopoda Protostomia Unknown 1
Npo-Mir-2-o45 None MIR-2 CACAGCC None None JACATO010000013.1 409573 409634 + Cephalopoda Protostomia Unknown 1 1
Npo-Mir-1-P21 None MIR-1 GGAAUGU None None JACATO010002176.1 1910758 1910818 - N. pompilius Bilateria Unknown 1
Npo-Mir-1-P20 None MIR-1 GGAAUGU None None JACATO010002176.1 801170 801230 - N. pompilius Bilateria Unknown 1
Npo-Let-7 None LET-7 GAGGUAG None None JACATO010000333.1 1272833 1272901 - Bilateria Bilateria Unknown 1
Npo-Bantam None BANTAM GAGAUCA None None JACATO010001708.1 33000 33061 + Protostomia Protostomia Unknown

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix