MirGeneDB 3.0

78 Nautilus pompilius microRNA genes
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Npo-Mir-12509 None MIR-12509 UUGGCAU None None JACATO010000392.1 79417 79473 - Cephalopoda Cephalopoda Unknown 1 1 1
Npo-Mir-12508 None MIR-12508 GGUUUUG None None JACATO010002112.1 168366 168426 + Cephalopoda Cephalopoda Unknown
Npo-Mir-12507 None MIR-12507 UGGGGGA None None JACATO010000938.1 295052 295110 + Cephalopoda Cephalopoda Unknown
Npo-Mir-12506 None MIR-12506 AGGAUCU None None JACATO010000920.1 279226 279289 - Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12505 None MIR-12505 GGAACAU None None JACATO010001118.1 124861 124918 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12504 None MIR-12504 UUGCUAU None None JACATO010002266.1 27541 27599 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12503 None MIR-12503 GAACCAU None None JACATO010000303.1 1527089 1527147 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12502 None MIR-12502 GUUCCUG None None JACATO010000113.1 605057 605116 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12501 None MIR-12501 CGGUCAU None None JACATO010000106.1 1204687 1204744 + Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12500 None MIR-12500 UGUCGGC None None JACATO010000115.1 633204 633265 - Cephalopoda Cephalopoda Unknown 1
Npo-Mir-12499 None MIR-12499 ACACCCG None None JACATO010000674.1 15031 15089 - Cephalopoda Cephalopoda Unknown
Npo-Mir-12498 None MIR-12498 GGGGAUG None None JACATO010000106.1 248968 249029 - Cephalopoda Cephalopoda Unknown
Npo-Mir-2722 None MIR-2722 GGCGCCG None None JACATO010000642.1 35108 35165 + Mollusca Mollusca Unknown 1
Npo-Mir-2001 None MIR-2001 UGUGACC None None JACATO010000601.1 22889 22948 + Bilateria Bilateria Unknown 1 1
Npo-Mir-1994-P2 None MIR-1994 GAGACAG None None JACATO010001148.1 5202 5261 + Mollusca Lophotrochozoa Unknown 1
Npo-Mir-1994-P1 None MIR-1994 GAGACAG None None JACATO010001148.1 4537 4597 + Mollusca Lophotrochozoa Unknown 1
Npo-Mir-1993 None MIR-1993 AUUAUGC None None JACATO010000926.1 735993 736050 + Protostomia Protostomia Unknown 1
Npo-Mir-1992 None MIR-1992 CAGCAGU None None JACATO010001876.1 280757 280818 - Platytrochozoa Platytrochozoa Unknown 1
Npo-Mir-1990-P2 None MIR-1990 GGGACUA None None JACATO010001038.1 22720 22775 + Lophotrochozoa Lophotrochozoa Unknown 1
Npo-Mir-1989 None MIR-1989 CAGCUGU None None JACATO010000654.1 597583 597645 - Platytrochozoa Platytrochozoa Unknown 1
Npo-Mir-1986 None MIR-1986 GGAUUUC None None JACATO010001038.1 23639 23696 + Lophotrochozoa Lophotrochozoa Unknown 1
Npo-Mir-1984 None MIR-1984 GCCCUAU None None JACATO010001899.1 857317 857375 + Conchifera Conchifera Unknown 1
Npo-Mir-1175 None MIR-1175 GAGAUUC None None JACATO010002729.1 331909 331975 - Protostomia Protostomia Unknown 1
Npo-Mir-750 None MIR-750 CAGAUCU None None JACATO010002729.1 339392 339453 - Protostomia Protostomia Unknown 1
Npo-Mir-375 None MIR-375 UUGUUCG None None JACATO010000016.1 364667 364725 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-317 None MIR-317 GAACACA None None JACATO010000333.1 1089799 1089857 - Protostomia Protostomia Unknown 1 1
Npo-Mir-315 None MIR-315 UUUGAUU None None JACATO010002187.1 127806 127865 + Nephrozoa Nephrozoa Unknown 1
Npo-Mir-281 None MIR-281 AGGGAGC None None JACATO010000628.1 121138 121194 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-279 None MIR-279 GACUAGA None None JACATO010000310.1 2271 2328 - Protostomia Protostomia Unknown 1
Npo-Mir-278 None MIR-278 CGGUGGG None None JACATO010002233.1 187893 187953 - Bilateria Bilateria Unknown 1
Npo-Mir-277 None MIR-277 AAAUGCA None None JACATO010000333.1 1081096 1081159 - Protostomia Protostomia Unknown 1 1
Npo-Mir-252-P2 None MIR-252 UAAGUAC None None JACATO010000601.1 30774 30835 + Bilateria Bilateria Unknown 1
Npo-Mir-252-P1 None MIR-252 UAAGUAG None None JACATO010000601.1 25040 25096 + Bilateria Bilateria Unknown 1
Npo-Mir-242 None MIR-242 UGCGUAG None None JACATO010000680.1 783878 783934 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-216-P2d None MIR-216 AAUCUCA None None JACATO010001670.1 35814 35871 - Lophotrochozoa Nephrozoa Unknown 1 1
Npo-Mir-216-P2c None MIR-216 AAUCUCA None None JACATO010001670.1 36790 36848 - Lophotrochozoa Nephrozoa Unknown 1 1
Npo-Mir-210 None MIR-210 UUGUGCG None None JACATO010001359.1 311486 311542 - Bilateria Bilateria Unknown 1
Npo-Mir-193-P1 None MIR-193 ACUGGCC None None JACATO010001571.1 56052 56109 + Bilateria Bilateria Unknown 1 1
Npo-Mir-190 None MIR-190 GAUAUGU None None JACATO010000364.1 464357 464420 + Bilateria Bilateria Unknown 1
Npo-Mir-184 None MIR-184 GGACGGA None None JACATO010002440.1 60805 60863 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-153 None MIR-153 UGCAUAG None None JACATO010000312.1 1302753 1302811 + Bilateria Bilateria Unknown 1 1
Npo-Mir-133-P21 None MIR-133 UGGUCCC None None JACATO010002176.1 796507 796570 - N. pompilius Bilateria Unknown 1 1
Npo-Mir-133-P20 None MIR-133 UGGUCCC None None JACATO010002176.1 796507 796570 - N. pompilius Bilateria Unknown 1 1
Npo-Mir-124 None MIR-124 AAGGCAC None None JACATO010000641.1 1918964 1919023 - Bilateria Bilateria Unknown 1
Npo-Mir-96-P2 None MIR-96 UUGGCAC None None JACATO010002187.1 172147 172208 + Bilateria Bilateria Unknown
Npo-Mir-96-P1i None MIR-96 UUUGGCA None None JACATO010002216.1 3017 3076 - Mollusca Bilateria Unknown 1
Npo-Mir-96-P1h None MIR-96 UUGGCAC None None JACATO010000647.1 143522 143579 - Mollusca Bilateria Unknown 1 1
Npo-Mir-92-o50 None MIR-92 AUUGCAC None None JACATO010000364.1 528075 528134 + N. pompilius Bilateria Unknown
Npo-Mir-92-o49 None MIR-92 AUUGCAC None None JACATO010000364.1 514428 514486 + N. pompilius Bilateria Unknown 1
Npo-Mir-92-o48 None MIR-92 AUUGCAC None None JACATO010000364.1 507045 507103 + N. pompilius Bilateria Unknown 1
Npo-Mir-76 None MIR-76 UCGUUGU None None JACATO010001886.1 50169 50231 + Nephrozoa Nephrozoa Unknown
Npo-Mir-71 None MIR-71 GAAAGAC None None JACATO010000013.1 409153 409211 + Nephrozoa Nephrozoa Unknown 1 1
Npo-Mir-67 None MIR-67 CACAACC None None JACATO010002147.1 136709 136767 + Protostomia Protostomia Unknown 1
Npo-Mir-36 None MIR-36 CACCGGG None None JACATO010000666.1 32488 32550 + Protostomia Protostomia Unknown
Npo-Mir-34 None MIR-34 GGCAGUG None None JACATO010000333.1 1074717 1074775 - Bilateria Bilateria Unknown 1 1
Npo-Mir-33 None MIR-33 UGCAUUG None None JACATO010000339.1 1425657 1425714 - Bilateria Bilateria Unknown 1 1
Npo-Mir-31 None MIR-31 GGCAAGA None None JACATO010001526.1 8601 8658 + Bilateria Bilateria Unknown 1 1
Npo-Mir-29-P2 None MIR-29 AGCACCA None None JACATO010002735.1 648688 648745 - Bilateria Bilateria Unknown 1 1
Npo-Mir-29-P1 None MIR-29 AGCACCA None None JACATO010002735.1 665922 665985 - Bilateria Bilateria Unknown
Npo-Mir-22-P2 None MIR-22 AGCUGCC None None JACATO010000578.1 916031 916089 + Bilateria Bilateria Unknown
Npo-Mir-22-P1 None MIR-22 GCUGCCU None None JACATO010000578.1 913063 913120 + Bilateria Bilateria Unknown 1 1
Npo-Mir-12 None MIR-12 GAGUAUU None None JACATO010001670.1 34868 34925 - Protostomia Protostomia Unknown 1 1
Npo-Mir-10-P6 None MIR-10 UUACCCU None None JACATO010002743.1 273043 273102 - Neotrochozoa Eumetazoa Unknown
Npo-Mir-10-P2 None MIR-10 ACCCGUA None None JACATO010000333.1 1284096 1284153 - Bilateria Eumetazoa Unknown
Npo-Mir-10-P1 None MIR-10 ACCCUGU None None JACATO010000127.1 517834 517889 + Bilateria Eumetazoa Unknown
Npo-Mir-9 None MIR-9 CUUUGGU None None JACATO010000367.1 1247889 1247950 - Bilateria Bilateria Unknown 1
Npo-Mir-8 None MIR-8 AAUACUG None None JACATO010001881.1 1172212 1172273 - Nephrozoa Nephrozoa Unknown 1
Npo-Mir-7 None MIR-7 GGAAGAC None None JACATO010000367.1 670460 670519 + Bilateria Bilateria Unknown 1 1 1
Npo-Mir-2-P12 None MIR-2 AUCACAG None None JACATO010000013.1 409697 409758 + Lophotrochozoa Protostomia Unknown 1
Npo-Mir-2-o49 None MIR-2 CAUCAAA None None JACATO010000013.1 410469 410530 + Cephalopoda Protostomia Unknown
Npo-Mir-2-o48b None MIR-2 AUCACAG None None JACATO010000013.1 410351 410409 + N. pompilius Protostomia Unknown 1
Npo-Mir-2-o48a None MIR-2 AUCACAG None None JACATO010000013.1 410153 410212 + N. pompilius Protostomia Unknown 1
Npo-Mir-2-o47 None MIR-2 CACAGCC None None JACATO010000013.1 409822 409878 + Cephalopoda Protostomia Unknown 1
Npo-Mir-2-o45 None MIR-2 CACAGCC None None JACATO010000013.1 409573 409634 + Cephalopoda Protostomia Unknown 1 1
Npo-Mir-1-P21 None MIR-1 GGAAUGU None None JACATO010002176.1 1910758 1910818 - N. pompilius Bilateria Unknown 1
Npo-Mir-1-P20 None MIR-1 GGAAUGU None None JACATO010002176.1 801170 801230 - N. pompilius Bilateria Unknown 1
Npo-Let-7 None LET-7 GAGGUAG None None JACATO010000333.1 1272833 1272901 - Bilateria Bilateria Unknown 1
Npo-Bantam None BANTAM GAGAUCA None None JACATO010001708.1 33000 33061 + Protostomia Protostomia Unknown

(red - mature/co-mature, blue - star)

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