| MirGeneDB ID | Npo-Mir-278 |
|---|---|
| Family name | MIR-278 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aae-Mir-278 Aga-Mir-278 Agr-Mir-278 Ava-Mir-278 Bfl-Mir-278 Bge-Mir-278 Bla-Mir-278 Csc-Mir-278 Cte-Mir-278 Dan-Mir-278 Dgr-Mir-278 Dlo-Mir-278 Dma-Mir-278 Dme-Mir-278 Dmo-Mir-278 Dpu-Mir-278 Dsi-Mir-278 Dya-Mir-278 Eba-Mir-278 Efe-Mir-278-P1-v1 Efe-Mir-278-P2 Esc-Mir-278 Gpa-Mir-278 Gsa-Mir-278 Hme-Mir-278 Hru-Mir-278 Isc-Mir-278 Lan-Mir-278 Lgi-Mir-278 Lhy-Mir-278 Llo-Mir-278-P6 Llo-Mir-278-P7 Lpo-Mir-278-P3 Lpo-Mir-278-P4 Lpo-Mir-278-P5 Mgi-Mir-278 Mom-Mir-278 Obi-Mir-278 Ofu-Mir-278 Ovu-Mir-278 Pau-Mir-278 Pca-Mir-278 Pcr-Mir-278 Pdu-Mir-278 Pfl-Mir-278 Pmi-Mir-278 Pve-Mir-278 Rph-Mir-278 Sko-Mir-278 Sme-Mir-278 Snu-Mir-278 Spu-Mir-278 Tur-Mir-278 War-Mir-278 Xbo-Mir-278 |
| Node of Origin (locus) | Bilateria |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_018389105_NPO) |
JACATO010002233.1: 187893-187953 [-] Ensembl |
| Seed | CGGUGGG |
| Precursor (pre-Mir +30nt flank) |
UUGGAAACACAUCACCACCGUUCGUUACGGCCGAAUGAAAGCCUCGUCAGAAUCUUGUUUGAUAAUUGAUCGGUGGGACUUUCGUUCGUUUGGAACGAGUGAUAUGACGUCGUGAUGACGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UUGGAAACACAUCACCAC--| A GC C GU A A UUGUUU CGUUCGUU CG CGAAUGAAAG CUC C GA UC \ GUGAGCAA GU GCUUGCUUUC GGG G CU AG G CGCAGUAGUGCUGCAGUAUA^ G UU A UG - - UUAAUA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-278_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCGAAUGAAAGCCUCGUCAGAAUC -24
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|
| Mature sequence | Npo-Mir-278_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UCGGUGGGACUUUCGUUCGUUU -61
Get sequence
|
