MirGeneDB 2.1
MirGeneDB ID

Bla-Mir-278

Family name MIR-278 (all species)
Seed CGGUGGG
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Aae-Mir-278  Bfl-Mir-278  Bge-Mir-278  Cgi-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Esc-Mir-278  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000086: 571182-571242 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAGCGGUCCUCCUUCGUCUCUCACCCGCCCGGACGAAGACCGUCGCCAGUCGUCGGCCUUCAGCAGAUCGGUGGGGUUUUCGUUCGAGUGGGGGAGACGACACAUACCACUAUACAUGC
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Structure
        10         20         30        40        50        60
CCCAGCGGUCCUCCUUC-   -|   A     C            G     A   GUCGGC 
                  GUC UCUC CCCGC CGGACGAAGACC UCGCC GUC      C
                  CAG AGAG GGGUG GCUUGCUUUUGG GGUGG UAG      U
CGUACAUAUCACCAUACA   C^   G     A            -     C   ACGACU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-278_5p*
mirBase accessionNone
Sequence 
0- CCGGACGAAGACCGUCGCCAGUC -23
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Mature sequence

Bla-Mir-278_3p
mirBase accessionNone
Sequence 
39- UCGGUGGGGUUUUCGUUCGAGU -61
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