| MirGeneDB ID | Npo-Mir-315 |
|---|---|
| Family name | MIR-315 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aae-Mir-315 Aga-Mir-315 Agr-Mir-315 Ava-Mir-315-P7 Ava-Mir-315-P8 Bge-Mir-315 Bko-Mir-315 Bpl-Mir-315 Cbr-Mir-315 Cel-Mir-315 Csc-Mir-315 Cte-Mir-315 Dan-Mir-315 Dgr-Mir-315-P1 Dgr-Mir-315-P2 Dlo-Mir-315 Dma-Mir-315 Dme-Mir-315 Dmo-Mir-315 Dpu-Mir-315 Dsi-Mir-315 Dya-Mir-315 Eba-Mir-315 Efe-Mir-315 Esc-Mir-315 Gpa-Mir-315 Gsp-Mir-315 Hru-Mir-315 Isc-Mir-315 Lan-Mir-315 Lgi-Mir-315 Lhy-Mir-315 Llo-Mir-315 Lpo-Mir-315-P3 Lpo-Mir-315-P4 Lpo-Mir-315-P5 Lpo-Mir-315-P6-v1 Mgi-Mir-315-v1 Mom-Mir-315 Nag-Mir-315 Obi-Mir-315 Ofu-Mir-315 Ovu-Mir-315 Pau-Mir-315 Pca-Mir-315 Pcr-Mir-315 Pdu-Mir-315 Pfl-Mir-315 Pma-Mir-315 Pve-Mir-315 Rph-Mir-315 Sko-Mir-315 Sme-Mir-315 Sne-Mir-315 Snu-Mir-315 Tca-Mir-315 Tur-Mir-315 War-Mir-315 |
| Node of Origin (locus) | Nephrozoa |
| Node of Origin (family) | Nephrozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010002187.1: 127806-127865 [+] Ensembl |
| Clustered miRNAs (< 50kb from Mir-315) |
Mir-315
JACATO010002187.1: 127806-127865 [+]
Ensembl
Mir-96-P2 JACATO010002187.1: 172147-172208 [+] Ensembl |
| Seed | UUUGAUU |
| Precursor (pre-Mir +30nt flank) |
GGGUAAAAAAAAAAAAAAUGUCUCUUCAUCUUUUGAUUGUAGCUCAGAAAGCCGGAACCAUGAACAGGCUAUCGAGUCGCAAUCAAAGACUGGUGGAGGCAGUUGAGCGGCGCCCGACAAGet precursor sequence |
| Structure | 10 20 30 40 50 GGGUAAAAAAAAAAAAAA- -| UC UA A A CGGAACC UGUCUCU UCA UUUUGAUUG GCUC GA AGC \ ACGGAGG GGU GAAACUAAC UGAG CU UCG A AACAGCCCGCGGCGAGUUG U^ CA GC - A GACAAGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-315_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUUGAUUGUAGCUCAGAAAGC -22
Get sequence
|
| Co-mature sequence | Npo-Mir-315_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UAUCGAGUCGCAAUCAAAGAC -60
Get sequence
|
