MirGeneDB 2.1
MirGeneDB ID

Esc-Mir-315

Family name MIR-315 (all species)
Seed UUUGAUU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-315  Bge-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Cgi-Mir-315-v1  Cgi-Mir-315-v2  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Efe-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Lpo-Mir-315-P6-v2  Npo-Mir-315  Obi-Mir-315  Ovu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Sko-Mir-315  Sme-Mir-315  Tca-Mir-315 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-315_pre_SRIE01000247.1:895737-895877: 41-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GACCGUCCGAUUAUUACAUGUCUCCUCACAUUUUGAUUGCUGCUCAGCAAGCGUGGUGAAAAGAACAGGUUGUCGAGUAGCAAUCAAAGACUGAUGGAGGCUGCAUUACAACAAGUGCCCG
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Structure
        10         20         30        40        50          
GACCGUCCGAUUAUUACAU-      -|  CA               A    GCGUGGUGA 
                    GUCUCC UCA  UUUUGAUUGCUGCUC GCAA         \
                    CGGAGG AGU  GAAACUAACGAUGAG UGUU         A
GCCCGUGAACAACAUUACGU      U^  CA               C    GGACAAGAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ce Li
Mature sequence

Esc-Mir-315_5p
mirBase accessionNone
Sequence 
0- UUUUGAUUGCUGCUCAGCAAGC -22
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Co-mature sequence

Esc-Mir-315_3p
mirBase accessionNone
Sequence 
39- UUGUCGAGUAGCAAUCAAAGAC -61
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