MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-315

Family name MIR-315 (all species)
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-315  Aga-Mir-315  Agr-Mir-315  Ava-Mir-315-P7  Ava-Mir-315-P8  Bge-Mir-315  Bko-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dgr-Mir-315-P1  Dgr-Mir-315-P2  Dlo-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Eba-Mir-315  Efe-Mir-315  Gpa-Mir-315  Gsp-Mir-315  Hru-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lhy-Mir-315  Llo-Mir-315  Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Mgi-Mir-315-v1  Mom-Mir-315  Nag-Mir-315  Npo-Mir-315  Obi-Mir-315  Ofu-Mir-315  Ovu-Mir-315  Pau-Mir-315  Pca-Mir-315  Pcr-Mir-315  Pdu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Pve-Mir-315  Rph-Mir-315  Sko-Mir-315  Sme-Mir-315  Sne-Mir-315  Snu-Mir-315  Tca-Mir-315  Tur-Mir-315  War-Mir-315 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(esc-GCA_024364805.1_ASM2436480v1)		 CM044515.1: 29695665-29695725 [+] Ensembl
Seed UUUGAUU
Precursor
(pre-Mir +30nt flank)		 
GACCGUCCGAUUAUUACAUGUCUCCUCACAUUUUGAUUGCUGCUCAGCAAGCGUGGUGAAAAGAACAGGUUGUCGAGUAGCAAUCAAAGACUGAUGGAGGCUGCAUUACAACAAGUGCCCG
Get precursor sequence
Structure
        10         20         30        40        50          
GACCGUCCGAUUAUUACAU-      -|  CA               A    GCGUGGUGA 
                    GUCUCC UCA  UUUUGAUUGCUGCUC GCAA         \
                    CGGAGG AGU  GAAACUAACGAUGAG UGUU         A
GCCCGUGAACAACAUUACGU      U^  CA               C    GGACAAGAA 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Li
Mature sequence

Esc-Mir-315_5p
mirBase accessionNone
Sequence 
0- UUUUGAUUGCUGCUCAGCAAGC -22
Get sequence
Co-mature sequence

Esc-Mir-315_3p
mirBase accessionNone
Sequence 
39- UUGUCGAGUAGCAAUCAAAGAC -61
Get sequence