| MirGeneDB ID | Npo-Mir-1984 |
|---|---|
| Family name | MIR-1984 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-1984 Hru-Mir-1984-P1 Hru-Mir-1984-P2 Lgi-Mir-1984-P1 Lgi-Mir-1984-P2 Lhy-Mir-1984 Mgi-Mir-1984-P1 Mgi-Mir-1984-P2 Obi-Mir-1984-P3 Obi-Mir-1984-P4 Ovu-Mir-1984-P3 Ovu-Mir-1984-P4 Pve-Mir-1984-P1 Pve-Mir-1984-P2 Rph-Mir-1984-P1 Rph-Mir-1984-P2 |
| Node of Origin (locus) | Conchifera |
| Node of Origin (family) | Conchifera |
| Genome context (GCA_018389105_NPO) |
JACATO010001899.1: 857317-857375 [+] Ensembl |
| Seed | GCCCUAU |
| Precursor (pre-Mir +30nt flank) |
ACAAAGUUAUCUUCAUCUGAGCUGUUGCCUUGCCCUAUACCUCAGUCGCUGACAUAAAUUAAAUUGCAGAGAUUGAUGUAUGUGGCUUGGUACUGGUUUCUUGAAGCAGCACAAUAAAUGet precursor sequence |
| Structure | 10 20 30 40 50 ACAAAGUUAUCUUCAUCU--| GU UU C C G ACAUAAA GAGCU UGCC GCC UAUAC UCAGUC CUG \ UUUGG AUGG CGG GUAUG AGUUAG GAC U UAAAUAACACGACGAAGUUC^ UC UU U U A GUUAAAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-1984_5p |
| mirBase accession | None |
| Sequence |
0- UGCCCUAUACCUCAGUCGCUGA -22
Get sequence
|
| Star sequence | Npo-Mir-1984_3p* |
| mirBase accession | None |
| Sequence |
37- AGAGAUUGAUGUAUGUGGCUUG -59
Get sequence
|
