| MirGeneDB ID | Npo-Mir-12498 |
|---|---|
| Family name | MIR-12498 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12498 Obi-Mir-12498 Ovu-Mir-12498 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010000106.1: 248968-249029 [-] Ensembl |
| Seed | GGGGAUG |
| Precursor (pre-Mir +30nt flank) |
CCACCCUGCUCAUACCUCUGCACCCGGUUUUGCCCUUCACAGGUAUCUCCUGGAUAGAGACUUGGACCCUGGGGAUGCUGUGAAUGGUUCUUACCGGGAGUAGUCUCUUGUCGGACACAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCACCCUGCUCAUACCU-- A UUU-| C G U AUAGAG CUGC CCCGGU GCC UUCACAG UAUCUCC GG A GAUG GGGCCA UGG AAGUGUC GUAGGGG CC C AGGACACAGGCUGUUCUCU A UUCU^ U - U CAGGUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Npo-Mir-12498_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UGCCCUUCACAGGUAUCUCCUGG -23
Get sequence
|
| Mature sequence | Npo-Mir-12498_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UGGGGAUGCUGUGAAUGGUUCUU -62
Get sequence
|
