| MirGeneDB ID | Obi-Mir-12498 |
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| Family name |
MIR-12498 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-12498
Npo-Mir-12498
Ovu-Mir-12498
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(PRJNA270931_OBI) |
KQ417540: 703817-703877 [-]
Ensembl
|
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| Seed |
GGGGAUG |
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Precursor
(pre-Mir +30nt flank) |
UCAAGGGAUCUACAACACUUGGCUAGAUAAUGCCCUUCACAGGUAUCUCCUGGAUAUGAACUGAAACCUGGGGAUGCUGUGAAUGGUUCUUACCUGGCCAGGAUUACGUCGAAAGGGUUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCAAGGGAUCUACAACA-- A U-| C G U AUAUGA
CUUGGCUAG UAA GCC UUCACAG UAUCUCC GG \
GGACCGGUC AUU UGG AAGUGUC GUAGGGG CC A
AUUUGGGAAAGCUGCAUUA C CU^ U - U AAAGUC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Obi-Mir-12498_5p* |
| mirBase accession | None |
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| Sequence |
0- UGCCCUUCACAGGUAUCUCCUGG -23
Get sequence
|
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| Mature sequence |
Obi-Mir-12498_3p |
| mirBase accession | None |
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| Sequence |
38- UGGGGAUGCUGUGAAUGGUUCUU -61
Get sequence
|
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