MirGeneDB 3.0
54 Brachionus plicatilis microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To
Bpl-Mir-12602 None MIR-12602 UUCACAA None None QEOQ01000303.1 258833 258893 - Brachionus Brachionus No 1
Bpl-Mir-12601 None MIR-12601 AGGCCAU None None QEOQ01000590.1 664374 664431 - Brachionus Brachionus Unknown 1
Bpl-Mir-12600 None MIR-12600 GACUAGG None None QEOQ01000041.1 165073 165130 + Brachionus Brachionus Unknown
Bpl-Mir-12599-P1b None MIR-12599 ACUAAAA None None QEOQ01000670.1 1230305 1230363 - B. plicatilis Brachionus No
Bpl-Mir-12599-P1a None MIR-12599 ACUAAAA None None QEOQ01000670.1 1235666 1235724 - B. plicatilis Brachionus No
Bpl-Mir-12598-P3b None MIR-12598 ACUGUUU None None QEOQ01000670.1 1235402 1235464 - B. plicatilis Rotifera No
Bpl-Mir-12598-P3a None MIR-12598 ACUGUUU None None QEOQ01000670.1 1230041 1230103 - B. plicatilis Rotifera No
Bpl-Mir-12598-P2b None MIR-12598 CACUGUU None None QEOQ01000670.1 1235286 1235349 - B. plicatilis Rotifera Unknown 1
Bpl-Mir-12598-P2a None MIR-12598 CACUGUU None None QEOQ01000670.1 1229925 1229988 - B. plicatilis Rotifera Unknown 1
Bpl-Mir-12598-P1b None MIR-12598 ACUGUUU None None QEOQ01000670.1 1230425 1230489 - B. plicatilis Rotifera No 1
Bpl-Mir-12598-P1a None MIR-12598 ACUGUUU None None QEOQ01000670.1 1235786 1235850 - B. plicatilis Rotifera No 1
Bpl-Mir-12597 None MIR-12597 UGCACAA None None QEOQ01000070.1 152998 153059 + Rotifera Rotifera No 1
Bpl-Mir-12596 None MIR-12596 AGAUGUA None None QEOQ01000192.1 1028040 1028121 + Rotifera Rotifera No
Bpl-Mir-12595-P2 None MIR-12595 AUCUGAC None None QEOQ01000433.1 273783 273841 - Brachionus Rotifera No 1
Bpl-Mir-12595-P1 None MIR-12595 AUCUGAC None None QEOQ01000487.1 32950 33015 - Brachionus Rotifera No 1
Bpl-Mir-12594 None MIR-12594 UAUCAGU None None QEOQ01000206.1 1063707 1063776 + Rotifera Rotifera No 1
Bpl-Mir-12593 None MIR-12593 CAUUCUC None None QEOQ01000256.1 676673 676748 + Rotifera Rotifera No 1 1
Bpl-Mir-1993 None MIR-1993 AUUAUGC None None QEOQ01000226.1 2985299 2985369 + Protostomia Protostomia No 1
Bpl-Mir-1175 None MIR-1175 GAGAUUC None None QEOQ01000670.1 513697 513772 - Protostomia Protostomia No 1
Bpl-Mir-750 None MIR-750 CAGAUCU None None QEOQ01000670.1 513838 513912 - Protostomia Protostomia No
Bpl-Mir-375 None MIR-375 UUGUUCG None None QEOQ01000431.1 375125 375191 - Nephrozoa Nephrozoa No 1
Bpl-Mir-315 None MIR-315 UUUGAUU None None QEOQ01000303.1 1511759 1511818 + Nephrozoa Nephrozoa No
Bpl-Mir-281 None MIR-281 GUCAUGG None None QEOQ01000141.1 1604465 1604523 + Nephrozoa Nephrozoa No 1
Bpl-Mir-279 None MIR-279 GACUAGA None None QEOQ01000658.1 377113 377175 - Protostomia Protostomia No
Bpl-Mir-277 None MIR-277 AAAUGCA None None QEOQ01000345.1 1249687 1249753 + Protostomia Protostomia No
Bpl-Mir-242 None MIR-242 UGCGUAG None None QEOQ01000508.1 5043559 5043655 - Nephrozoa Nephrozoa No 1 1
Bpl-Mir-219 None MIR-219 GAUUGUC None None QEOQ01000451.1 276104 276163 - Bilateria Bilateria No 1
Bpl-Mir-216-P2 None MIR-216 AAUCUCA None None QEOQ01000141.1 555888 555952 + Nephrozoa Nephrozoa No
Bpl-Mir-190 None MIR-190 GAUAUGU None None QEOQ01000204.1 1583577 1583655 - Bilateria Bilateria No
Bpl-Mir-184 None MIR-184 GGACGGA None None QEOQ01000041.1 339214 339312 + Nephrozoa Nephrozoa No 1
Bpl-Mir-153 None MIR-153 UGCAUAG None None QEOQ01000261.1 59254 59310 + Bilateria Bilateria No 1
Bpl-Mir-137 None MIR-137 UAUUGCU None None QEOQ01000204.1 46455 46526 - Bilateria Bilateria Unknown 1
Bpl-Mir-124 None MIR-124 AAGGCAC None None QEOQ01000274.1 826179 826260 + Bilateria Bilateria Unknown
Bpl-Mir-96-P3 None MIR-96 AUGGCAC None None QEOQ01000331.1 32991 33061 + Bilateria Bilateria Unknown 1
Bpl-Mir-87-o7 None MIR-87 UGAGCAA None None QEOQ01000573.1 507118 507197 + Brachionus Protostomia No 1
Bpl-Mir-76 None MIR-76 UCGUUGU None None QEOQ01000253.1 314354 314431 + Nephrozoa Nephrozoa No 1 1
Bpl-Mir-36-P18 None MIR-36 CACCGGG None None QEOQ01000180.1 141350 141410 - Brachionus Protostomia No
Bpl-Mir-36-P17 None MIR-36 CACCGGG None None QEOQ01000180.1 141460 141519 - B. plicatilis Protostomia No 1
Bpl-Mir-36-P16 None MIR-36 CACCGGG None None QEOQ01000180.1 141578 141633 - Brachionus Protostomia No
Bpl-Mir-31 None MIR-31 GGCAAGA None None QEOQ01000345.1 929582 929639 + Bilateria Bilateria No 1
Bpl-Mir-29-o3 None MIR-29 AGCACCA None None QEOQ01000316.1 109373 109456 - B. plicatilis Bilateria No
Bpl-Mir-22-P1 None MIR-22 GCUGCCU None None QEOQ01000204.1 59727 59785 - Bilateria Bilateria Unknown
Bpl-Mir-12 None MIR-12 GAGUAUU None None QEOQ01000141.1 556006 556066 + Protostomia Protostomia Unknown
Bpl-Mir-10-P4 None MIR-10 AAGCUCG None None QEOQ01000707.1 752802 752861 - Protostomia Eumetazoa No
Bpl-Mir-10-P3 None MIR-10 CCCUGAG None None QEOQ01000206.1 735219 735286 + Bilateria Eumetazoa No
Bpl-Mir-10-P2 None MIR-10 ACCCGUA None None QEOQ01000206.1 734853 734946 + Bilateria Eumetazoa No
Bpl-Mir-9 None MIR-9 UAAAGCU None None QEOQ01000508.1 5682168 5682235 - Bilateria Bilateria No
Bpl-Mir-8 None MIR-8 AAUACUG None None QEOQ01000214.1 392068 392129 - Nephrozoa Nephrozoa Unknown
Bpl-Mir-7-P19 None MIR-7 GGAAGAC None None QEOQ01000688.1 553398 553465 - B. plicatilis Bilateria Unknown
Bpl-Mir-7-P18 None MIR-7 GGAAGAC None None QEOQ01000688.1 553513 553572 - B. plicatilis Bilateria Unknown 1
Bpl-Mir-1-P23 None MIR-1 GGAAUGU None None QEOQ01000508.1 2616878 2616960 + Brachionus Bilateria No 1
Bpl-Mir-1-P22 None MIR-1 GGAAUGU None None QEOQ01000226.1 1075395 1075454 - Brachionus Bilateria No 1
Bpl-Let-7 None LET-7 GAGGUAG None None QEOQ01000206.1 735008 735167 + Bilateria Bilateria No 1
Bpl-Bantam None BANTAM GAGAUCA None None QEOQ01000508.1 6576969 6577030 + Protostomia Protostomia Unknown 1

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