MirGeneDB 2.1

MirGeneDB ID

Bpl-Mir-7-P19

Family name MIR-7 (all species)
Seed GGAAGAC
Species Rotifer (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-7-P18 
Orthologues Aae-Mir-7  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lgi-Mir-7  Lpo-Mir-7  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pmi-Mir-7  Sko-Mir-7  Spu-Mir-7  Tca-Mir-7  Xbo-Mir-7 
Node of Origin (locus) B. plicatilis
Node of Origin (family) Bilateria
Genome context
(Bpl_ASM1027981)
QEOQ01000688.1: 553398-553465 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAACUAACAAUUUGAAAAGCUCGAUCUUUGUGGAAGACUAAUGAUUUUGUGUUUGGUUAAAAUUUGUGGUUCUUAACAUAAAAUCUAAGUUUUCCGCAAAGUCUGCUUUGAACUAACAGCUAAAAAUU
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Structure
        10            20        30        40        50        60    
CAACUAACAAUUUGAAA----|  UC  U              AAU           UGGUUAAAAU 
                     AGC  GA CUUUGUGGAAGACU   GAUUUUGUGUU          \
                     UCG  CU GAAACGCCUUUUGA   CUAAAAUACAA          U
UUAAAAAUCGACAAUCAAGUU^  U-  -              AU-           UUCUUGGUGU 
      120       110         100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Bpl-Mir-7-P19_5p

mirBase accessionNone
Sequence
0- UGGAAGACUAAUGAUUUUGUGUU -23
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Star sequence

Bpl-Mir-7-P19_3p* (predicted)

mirBase accessionNone
Sequence
46- CAUAAAAUCUAAGUUUUCCGCA -68
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