MirGeneDB 3.0
75 microRNA genes with seed GAGAUCA
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Aae-Bantam aae-bantam BANTAM GAGAUCA MIMAT0014218 MIMAT0014219 supercont1.49 1579554 1579618 - Protostomia Protostomia No 1
Aga-Bantam aga-bantam BANTAM GAGAUCA None MIMAT0001494 NC_064601.1 33021600 33021666 + Protostomia Protostomia No
Agr-Bantam None BANTAM GAGAUCA None None JABBOT010000002.1 27885525 27885587 + Protostomia Protostomia No
Bge-Bantam None BANTAM GAGAUCA None None KZ614636.1 591905 591964 + Protostomia Protostomia No
Bko-Bantam None BANTAM GAGAUCA None None PJRA01000030.1 7050 7111 - Protostomia Protostomia Unknown 1 1
Bpl-Bantam None BANTAM GAGAUCA None None QEOQ01000508.1 6576969 6577030 + Protostomia Protostomia Unknown 1
Cte-Bantam cte-bantam BANTAM GAGAUCA None MIMAT0009551 CAPTEscaffold_114 319163 319225 + Protostomia Protostomia No
Dan-Bantam dan-bantam BANTAM GAGAUCA None MIMAT0008409 scaffold_13337 6520601 6520660 - Protostomia Protostomia No
Dgr-Bantam None BANTAM GAGAUCA None None CAJFCJ010000008.1 1141975 1142034 - Protostomia Protostomia Unknown 1
Dlo-Bantam None BANTAM GAGAUCA None None NC_087231.1 5746998 5747057 - Protostomia Protostomia No 1
Dma-Bantam None BANTAM GAGAUCA None None NC_046176.1 6757482 6757544 - Protostomia Protostomia No
Dme-Bantam dme-bantam BANTAM GAGAUCA MIMAT0020823 MIMAT0000365 3L 642222 642281 + Protostomia Protostomia No
Dmo-Bantam dmo-bantam BANTAM GAGAUCA None MIMAT0008634 scaffold_6680 4143325 4143385 + Protostomia Protostomia No
Dpu-Bantam dpu-bantam BANTAM GAGAUCA None MIMAT0012634 DAPPUscaffold_115 370169 370231 + Protostomia Protostomia No
Dsi-Bantam dsi-bantam BANTAM GAGAUCA None MIMAT0008861 3L 606947 607006 + Protostomia Protostomia No
Dya-Bantam dya-bantam BANTAM GAGAUCA None MIMAT0009057 3L 629668 629727 + Protostomia Protostomia No
Eba-Bantam None BANTAM GAGAUCA None None WURV02052454.1 13781 13842 + Protostomia Protostomia No 1
Esc-Bantam None BANTAM GAGAUCA None None CM044512.1 77471093 77471154 - Protostomia Protostomia No
Gpa-Bantam None BANTAM GAGAUCA None None Scaffold4 3165913 3165971 - Protostomia Protostomia No
Gsa-Bantam gsa-bantam BANTAM GAGAUCA MIMAT0035290 MIMAT0035291 scf7180006948641 4769 4854 + Protostomia Protostomia No 1 1
Gsp-Bantam None BANTAM GAGAUCA None None OX940785.1 16621714 16621776 - Protostomia Protostomia No
Hme-Bantam hme-bantam BANTAM GAGAUCA None MIMAT0024930 HE670669 51613 51673 + Protostomia Protostomia No
Hru-Bantam None BANTAM GAGAUCA None None JALGQA010000011.1 21773818 21773879 - Protostomia Protostomia No
Lan-Bantam None BANTAM GAGAUCA None None LFEI01000073 143314 143376 + Protostomia Protostomia No 1
Lgi-Bantam None BANTAM GAGAUCA None None LOTGIsca_212 233725 233783 + Protostomia Protostomia No
Lhy-Bantam None BANTAM GAGAUCA None None scaffold197743_34.1 3911 3969 - Protostomia Protostomia No 1
Llo-Bantam None BANTAM GAGAUCA None None OU342992.1 20295277 20295339 - Protostomia Protostomia No
Mgi-Bantam None BANTAM GAGAUCA None None scaffold950 540423 540481 + Protostomia Protostomia No
Mom-Bantam None BANTAM GAGAUCA None None JARFOD010046963.1 5339 5400 - Protostomia Protostomia No
Nag-Bantam None BANTAM GAGAUCA None None k149_10246 8432 8488 - Protostomia Protostomia No 1
Npo-Bantam None BANTAM GAGAUCA None None JACATO010001708.1 33000 33061 + Protostomia Protostomia Unknown
Ofu-Bantam None BANTAM GAGAUCA None None CAIIXF020000009.1 32750669 32750726 + Protostomia Protostomia No
Ovu-Bantam None BANTAM GAGAUCA None None RXHP01075879.1 111414 111475 - Protostomia Protostomia No
Pau-Bantam None BANTAM GAGAUCA None None NMRA01000117.1 72619 72679 - Protostomia Protostomia No
Pcr-Bantam None BANTAM GAGAUCA None None CAJQUW010010557.1 86896 86957 - Protostomia Protostomia No 1
Ple-Bantam None BANTAM GAGAUCA None None WNNJ02000695.1 29898 29953 + Protostomia Protostomia No 1
Pve-Bantam None BANTAM GAGAUCA None None Pve_Chr10 419251153 419251211 + Protostomia Protostomia No 1 1
Sne-Bantam None BANTAM GAGAUCA None None k141_1043 29816 29935 - Protostomia Protostomia No
Snu-Bantam None BANTAM GAGAUCA None None CM049307.1 5749469 5749529 + Protostomia Protostomia No
Tca-Bantam tca-bantam BANTAM GAGAUCA MIMAT0019178 MIMAT0010091 LG3 16990366 16990425 + Protostomia Protostomia No
Tur-Bantam None BANTAM GAGAUCA None None HE587306.1 2889816 2889879 - Protostomia Protostomia No 1
War-Bantam None BANTAM GAGAUCA None None WNLI01153432.1 373 429 - Protostomia Protostomia No 1
Asu-Bantam-o1 asu-mir-81a BANTAM GAGAUCA None MIMAT0021474 Scaffold406 346015 346076 + A.suum Protostomia No 1
Asu-Bantam-o2 asu-mir-81c BANTAM GAGAUCA MIMAT0021421 MIMAT0021422 Scaffold20 144531 144589 + A.suum Protostomia No 1
Asu-Bantam-o3 asu-mir-81b BANTAM GAGAUCA MIMAT0021419 MIMAT0021420 Scaffold20 148295 148353 + A.suum Protostomia No 1 1
Cbr-Bantam-P1b cbr-mir-58b BANTAM GAGAUCA None MIMAT0011482 IV 149584 149644 + C. briggsae Protostomia No
Cbr-Bantam-P2 cbr-mir-80 BANTAM GAGAUCA None MIMAT0000487 III 14440888 14440953 - Caenorhabditis Protostomia No
Cel-Bantam-P2 cel-mir-80 BANTAM GAGAUCA MIMAT0000052 MIMAT0000053 chrIII 8865285 8865349 - Caenorhabditis Protostomia No
Cbr-Bantam-P3 cbr-mir-81 BANTAM GAGAUCA None MIMAT0000488 X 4359703 4359767 - Caenorhabditis Protostomia No
Cel-Bantam-P3 cel-mir-81 BANTAM GAGAUCA MIMAT0015109 MIMAT0000054 chrX 2431096 2431159 + Caenorhabditis Protostomia No
Cbr-Bantam-P4 cbr-mir-82 BANTAM GAGAUCA None MIMAT0000489 X 4356782 4356845 + Caenorhabditis Protostomia No
Cel-Bantam-P4 cel-mir-82 BANTAM GAGAUCA MIMAT0020323 MIMAT0000055 chrX 2435273 2435333 - Caenorhabditis Protostomia No
Cel-Bantam-P5a cel-mir-2209a BANTAM GAGAUCA MIMAT0011431 MIMAT0011432 chrIV 1027102 1027164 + C. elegans Protostomia No
Efe-Bantam-P6 None BANTAM GAGAUCA None None Efet.01.59348 454 515 + E. fetida Protostomia No
Efe-Bantam-P7 None BANTAM GAGAUCA None None Efet.01.127987 1361 1420 - E. fetida Protostomia No
Efe-Bantam-P8 None BANTAM GAGAUCA None None Efet.01.377353 2266 2325 + E. fetida Protostomia No 1
Isc-Bantam-P9a isc-bantam BANTAM GAGAUCA None MIMAT0012679 NW_024609881.1 54625045 54625105 + I. scapularis Protostomia No
Isc-Bantam-P9b isc-bantam BANTAM GAGAUCA None MIMAT0012679 NW_024609881.1 54625045 54625105 + I. scapularis Protostomia No
Lpo-Bantam-P10 None BANTAM GAGAUCA None None NW_013668390.1 57984 58044 - L. polyphemus Protostomia No 1
Lpo-Bantam-P11 None BANTAM GAGAUCA None None NW_013666657.1 258431 258491 - L. polyphemus Protostomia No 1
Lpo-Bantam-P12 None BANTAM GAGAUCA None None NW_013667299.1 126779 126839 + L. polyphemus Protostomia No
Lpo-Bantam-P13 None BANTAM GAGAUCA None None NW_013670185.1 24874 24934 - L. polyphemus Protostomia No
Lpo-Bantam-P14 None BANTAM GAGAUCA None None NW_013670945.1 64919 64979 + L. polyphemus Protostomia No
Lpo-Bantam-P15 None BANTAM GAGAUCA None None NW_013674997.1 13900 13959 - L. polyphemus Protostomia No
Csc-Bantam-P16 None BANTAM GAGAUCA None None NW_019385956.1 96869 96929 - C. sculpturatus Protostomia No
Csc-Bantam-P17 None BANTAM GAGAUCA None None NW_019384376.1 788122 788182 - C. sculpturatus Protostomia No
Sme-Bantam-P18 sme-bantam-a BANTAM GAGAUCA None MIMAT0003949 NNSW01000048_dd_Smes_g4_48 1523214 1523273 - S. mediterranea Protostomia No 1
Sme-Bantam-P19 sme-bantam-b BANTAM GAGAUCA MIMAT0012085 MIMAT0003950 NNSW01000024_dd_Smes_g4_24 5777402 5777455 + S. mediterranea Protostomia No
Sme-Bantam-P20 sme-bantam-c-1 BANTAM GAGAUCA MIMAT0012086 MIMAT0003951 NNSW01000102_dd_Smes_g4_102 1106013 1106065 - S. mediterranea Protostomia No 1
Rph-Bantam-P21 None BANTAM GAGAUCA None None CM018540.1 15041974 15042034 - R. philippinarum Protostomia No 1
Rph-Bantam-P22 None BANTAM GAGAUCA None None CM018540.1 15041340 15041400 - R. philippinarum Protostomia No 1
Ava-Bantam-P24 None BANTAM GAGAUCA None None CP075494.1 5822042 5822105 + A. vaga Protostomia No
Pdu-Bantam-P25 None BANTAM GAGAUCA None None JAPTHN010000002.1 72665914 72665975 - P. dumerilii Protostomia No 1
Pdu-Bantam-P26 None BANTAM GAGAUCA None None JAPTHN010000002.1 72666495 72666557 - P. dumerilii Protostomia No 1
Dmo-Mir-9538 None MIR-9538 GAGAUCA None None scaffold_6540 6630127 6630196 + D. mojavensis D. mojavensis No 1

(red - mature/co-mature, blue - star)

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