MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-181-P2c

Family name MIR-181 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-181-P1a  Neu-Mir-181-P1b  Neu-Mir-181-P1c  Neu-Mir-181-P2a  Neu-Mir-181-P2b 
Orthologues Aca-Mir-181-P2c  Ami-Mir-181-P2c  Bta-Mir-181-P2c  Cfa-Mir-181-P2c  Cja-Mir-181-P2c  Cmi-Mir-181-P2c  Cpi-Mir-181-P2c  Dno-Mir-181-P2c  Dre-Mir-181-P2c1  Dre-Mir-181-P2c2  Eca-Mir-181-P2c  Ete-Mir-181-P2c  Gmo-Mir-181-P2c1  Gmo-Mir-181-P2c2  Hsa-Mir-181-P2c  Laf-Mir-181-P2c  Lch-Mir-181-P2c  Loc-Mir-181-P2c  Mal-Mir-181-P2c1  Mal-Mir-181-P2c2  Mdo-Mir-181-P2c  Mml-Mir-181-P2c  Mmr-Mir-181-P2c  Mmu-Mir-181-P2c  Mun-Mir-181-P2c  Oan-Mir-181-P2c  Ocu-Mir-181-P2c  Pab-Mir-181-P2c  Pbv-Mir-181-P2c  Rno-Mir-181-P2c  Sha-Mir-181-P2c  Spt-Mir-181-P2c3  Spt-Mir-181-P2c4  Sto-Mir-181-P2c  Tni-Mir-181-P2c1-v1  Tni-Mir-181-P2c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051816.1: 77084522-77084585 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2c)		 Mir-181-P2c CM051816.1: 77084522-77084585 [-] UCSC Ensembl
Mir-181-P1c CM051816.1: 77084868-77084930 [-] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
UUUUGCCCACCUAAAACAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGUGAGAUGUGAGGCAAAACUCACCGAUGGAUGAAUGUCACUGUGGCUGGGCCAGACUUGGACCUGGAGAG
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Structure
        10        20           30        40        50        60  
UUUUGCCCACCUAAAACAAA---|      AUCA        UG            UGUGAGAU 
                       GGUCACA    ACAUUCAU  CUGUCGGUGGGU        G
                       UCGGUGU    UGUAAGUA  GGUAGCCACUCA        U
GAGAGGUCCAGGUUCAGACCGGG^      CAC-        --            AAACGGAG 
  120       110       100         90          80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-181-P2c_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGU -23
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Star sequence

Neu-Mir-181-P2c_3p*
mirBase accessionNone
Sequence 
43- UCACCGAUGGAUGAAUGUCAC -64
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