MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-144

Family name MIR-144 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Aca-Mir-144-v1  Ami-Mir-144  Bta-Mir-144-v1  Cfa-Mir-144-v1  Cja-Mir-144-v1  Cli-Mir-144-v1  Cmi-Mir-144  Cpi-Mir-144  Cpo-Mir-144-v1  Dno-Mir-144  Dre-Mir-144-v1  Ebu-Mir-144-v1  Eca-Mir-144-v1  Ete-Mir-144  Gga-Mir-144  Gja-Mir-144-v1  Gmo-Mir-144-v1  Hsa-Mir-144-v1  Lch-Mir-144  Loc-Mir-144-v1  Mal-Mir-144-v1  Mdo-Mir-144  Mml-Mir-144  Mmr-Mir-144  Mmu-Mir-144-v1  Mun-Mir-144-v1  Neu-Mir-144-v1  Oan-Mir-144  Ocu-Mir-144-v1  Pab-Mir-144-v1  Pbv-Mir-144  Pma-Mir-144  Rno-Mir-144-v1  Sha-Mir-144  Spt-Mir-144  Sto-Mir-144  Tgu-Mir-144-v1  Tni-Mir-144  Xla-Mir-144-P1-v1  Xla-Mir-144-P2-v1  Xtr-Mir-144 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010074.1: 1839018-1839075 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-144)		 Mir-451 GL010074.1: 1838854-1838895 [-] UCSC Ensembl
Mir-144 GL010074.1: 1839018-1839075 [-] UCSC Ensembl
Seed GAUAUCA
Precursor
(pre-Mir +30nt flank)		 
CUCACCAUGCCCCCUGCAGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGUGAUGAGACACUACAGUAUAGAUGAUGUACUAGUCCGGGUACCCCCAGCUCUGGCGCCUGAC
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Structure
        10        20          30        40        50         
CUCACCAUGCCCCCUGCA   --|  U      G        A         A  UUGUG 
                  GGG  CCC GGCUGG AUAUCAUC UAUACUGUA GU     A
                  CCC  GGG CUGAUC UGUAGUAG AUAUGACAU CA     U
CAGUCCGCGGUCUCGACC   AU^  C      A        -         -  CAGAG 
      110       100        90        80         70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-144_5p
mirBase accessionNone
Sequence 
0- GGAUAUCAUCAUAUACUGUAAGU -23
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Co-mature sequence

Laf-Mir-144_3p
mirBase accessionNone
Sequence 
36- CUACAGUAUAGAUGAUGUACUA -58
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