Mir-144

MirGeneDB ID

Dno-Mir-144

Family name

MIR-144 (all species)

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

dno-mir-144

Paralogues

Orthologues

Aca-Mir-144-v1 Ami-Mir-144 Bta-Mir-144-v1 Cfa-Mir-144-v1 Cja-Mir-144-v1 Cli-Mir-144-v1 Cmi-Mir-144 Cpi-Mir-144 Cpo-Mir-144-v1 Dre-Mir-144-v1 Ebu-Mir-144-v1 Eca-Mir-144-v1 Ete-Mir-144 Gga-Mir-144 Gja-Mir-144-v1 Gmo-Mir-144-v1 Hsa-Mir-144-v1 Laf-Mir-144 Lch-Mir-144 Loc-Mir-144-v1 Mal-Mir-144-v1 Mdo-Mir-144 Mml-Mir-144 Mmr-Mir-144 Mmu-Mir-144-v1 Mun-Mir-144-v1 Neu-Mir-144-v1 Oan-Mir-144 Ocu-Mir-144-v1 Pab-Mir-144-v1 Pbv-Mir-144 Pma-Mir-144 Rno-Mir-144-v1 Sha-Mir-144 Spt-Mir-144 Sto-Mir-144 Tgu-Mir-144-v1 Tni-Mir-144 Xla-Mir-144-P1-v1 Xla-Mir-144-P2-v1 Xtr-Mir-144

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(dasNov3)

JH563368: 9611-9668 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-144)

Mir-144 JH563368: 9611-9668 [+] UCSC Ensembl
Mir-451 JH563368: 9790-9831 [+] UCSC Ensembl

Seed

ACAGUAU

Precursor
(pre-Mir +30nt flank)

CAUGUCCCGUCCCCUGCAGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCAAUGAGAUACUACAGUAUAGAUGAUGUACUAGUCCGGGUACCCCAGCUCUGGAGCCUGACA

Get precursor sequence

Structure

        10        20          30        40        50         
CAUGUCCCGUCCCCUGCA   --|  U      G        A         AGUUUGCA 
                  GGG  CCC GGCUGG AUAUCAUC UAUACUGUA        \
                  CCC  GGG CUGAUC UGUAGUAG AUAUGACAU        A
ACAGUCCGAGGUCUCGAC   AU^  C      A        -         CAUAGAGU 
      110       100        90        80         70        60